Sphingobacterium daejeonense: NCTC13534_04330
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Entry
NCTC13534_04330 CDS
T06632
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00470
D-Amino acid metabolism
sdj00550
Peptidoglycan biosynthesis
sdj01100
Metabolic pathways
sdj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC13534_04330 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC13534_04330 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC13534_04330 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdj01011
]
NCTC13534_04330 (ddl)
Enzymes [BR:
sdj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NCTC13534_04330 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdj01011
]
Precursor biosynthesis
Amino acid ligase
NCTC13534_04330 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp
ATP-grasp_3
GARS_A
TTL
Ned1_M
Motif
Other DBs
NCBI-ProteinID:
VTQ03632
LinkDB
All DBs
Position
1:complement(3610533..3611537)
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AA seq
334 aa
AA seq
DB search
MKTKVALITGGYTGEAEISYKSSAFVYSQIDKEKYDVFLIDITPQSWGYIDQDNQKHEID
RQDFSLNINNEKIHFDVAFIILHGTPGEDGRLQGYFDMIGLPYTSCGALTSSLTMNKGYT
KAIIQDIDQLNVAQSVLLFDIDRPKASEVVKNKLSLPLFVKPNAGGSSIGMNKVNTWEEL
PKALDDAYDAEGTGKQVLVEEFVKGREFSQGIYRDSKGELQVLPATEVITTREFFDFEAK
YTPGLTQEITPAEINADQKNRADEIIKEIYIRLNCKGMVRVDFFLQNETDKFYFIEINTI
PGQTPQSFIPQQVKASGRTATEFYGELIEAALIS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaagtagcattaattactggaggatacaccggagaggctgaaatttcttat
aaaagttcggcatttgtgtactcgcaaattgataaagaaaaatatgatgttttccttatc
gatattactccacaaagctgggggtatattgatcaggacaatcaaaaacatgaaattgac
cgtcaagacttttcattgaacatcaataatgaaaagatacatttcgatgtggcatttatc
attcttcatggaactccaggagaagatggaaggctgcaaggatattttgatatgattgga
ttgccatatacatcctgcggagcccttacttcttcattaacgatgaataaaggttatacc
aaagctattatccaggatattgatcaattaaatgtagcacagtcggtgcttttatttgac
attgataggccaaaagcttccgaagttgtgaaaaacaaactctcattgcccttatttgta
aagcctaatgctggtggaagtagtatcggtatgaataaagtaaatacttgggaagaactg
cccaaagcattggacgatgcctatgacgcagaaggaacaggaaagcaggtgcttgtagag
gaatttgtaaaaggtagagaattctcccaaggcatctatagggactccaaaggtgaattg
caggtattgccagcaacagaggttatcaccacccgtgaatttttcgactttgaagcaaaa
tatacgcctgggttaactcaagaaattactcctgcagaaataaatgctgaccaaaaaaat
agagccgacgaaatcattaaggaaatttatatccgcttgaattgtaaaggaatggtacgg
gtagattttttccttcaaaatgaaactgataaattctattttatcgaaatcaacacaatc
ccaggacaaacaccacagagctttatccctcaacaagtcaaagcatccggaagaacagca
acagaattctacggtgaactgatcgaagcagctctaatatcctaa
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