Sphingobacterium daejeonense: NCTC13534_04361
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Entry
NCTC13534_04361 CDS
T06632
Symbol
gyrB_4
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdj03032
]
NCTC13534_04361 (gyrB_4)
03400 DNA repair and recombination proteins [BR:
sdj03400
]
NCTC13534_04361 (gyrB_4)
Enzymes [BR:
sdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC13534_04361 (gyrB_4)
DNA replication proteins [BR:
sdj03032
]
Prokaryotic type
DNA Topoisomerases
NCTC13534_04361 (gyrB_4)
DNA repair and recombination proteins [BR:
sdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC13534_04361 (gyrB_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
VTQ03756
LinkDB
All DBs
Position
1:complement(3644458..3645960)
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AA seq
500 aa
AA seq
DB search
MSEENKNASTYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAVAGY
CNDIVVTILKSNGVSVRDNGRGIPTGINKKEKKSALELVMTVLHAGGKFDKDTYKVSGGL
HGVGVSCVNALSTHLRAEVHREGKIFVQEYSQGKPQEDVKEIGVSEDTGTIVTFQPDPEI
FTTTTVYNYDTLANRLRELSFLNKGITLTLIDEREILDNGEFKKNVYLSEGGLQEFVKFL
DGNRTALIPEPIYVEGIKQGVPVELALQYNDTYSENVHSYVNNINTIEGGSHVAGFRRGL
TRTLKKYADDSGLLKNLKVEITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGAV
DVAVGEILSSYLEENPKEAKQIVQKVVIAAQARAAARKARELVQRKTVMGGSGLPGKLAD
CSDRDPNRCEIFFVEGDSAGGTAKQGRDRATQAIMPLRGKILNVEKAMEHKIYENEEIKN
MFTALGVSHWNSRRFKSSEH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaataaaaatgcatctacgtattcagcggataatatccaggtattagaa
ggattagaagctgtacgtaagcgcccttccatgtacatcggtgatacaggcgtaaaaggt
ctacatcacttggtttatgaagtagtcgataactctatcgatgaagctgttgccggttat
tgtaacgacattgtagtaaccattttaaaatctaacggtgtatcagttcgcgataatggt
cgcggtattccaacaggaatcaataaaaaagaaaagaaatctgctttagagcttgtaatg
acagtattgcacgccggtggtaaattcgacaaggatacttataaggtttccggtggtttg
cacggtgtgggtgtatcctgtgtgaacgctttatctacgcatttgcgtgcagaagtacac
agagaaggaaagatctttgtgcaagaatattctcaaggtaaaccacaagaggatgtaaaa
gaaatcggtgtcagtgaagatactggtaccatcgttacattccaaccggatccagagatt
tttacaactaccactgtatataactatgacaccttagctaaccgcttaagggaattgtca
ttcttgaacaaaggcattacattgacattgatcgatgagagagaaatcctggataatggc
gagttcaagaaaaatgtatacttgtcagaaggtggtcttcaagaattcgttaaattcttg
gatggtaacagaactgcattgatccctgagccaatttatgttgaaggtattaagcaaggt
gtaccagttgaacttgctcttcaatacaatgatacttattcagaaaatgtacattcatat
gtgaacaacatcaatacaattgagggtggttctcatgtggcaggtttccgtagaggattg
acacgtacattgaaaaaatatgcggatgactctggtttgttgaaaaatttgaaggttgaa
atcacaggtgatgacttccgtgaaggtttaacagctgtaatttctgttaaagttgcagag
ccacaatttgaaggtcaaacaaagaccaaattaggaaactctgaagttatgggtgctgta
gatgttgctgtaggcgagatcttgagctcatatttggaagaaaaccctaaggaggctaaa
cagatcgttcaaaaggtagtaattgctgctcaggcacgcgctgctgctcgtaaagctaga
gaactcgtacagcgtaaaactgtgatgggtggttcaggcttaccgggtaaattggcggac
tgttcggacagagaccctaatagatgtgagattttctttgtcgagggtgattctgcgggt
ggaactgctaaacaaggtagggaccgtgctacacaagcgattatgcctttgagaggtaag
atcctgaatgtggagaaagcaatggaacataagatctatgagaatgaagagatcaagaat
atgtttactgcgcttggtgtaagccattggaacagccgaagattcaaaagctctgaacat
tga
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