Sphingobacterium daejeonense: NCTC13534_05449
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Entry
NCTC13534_05449 CDS
T06632
Name
(GenBank) TL29
KO
K03530
DNA-binding protein HU-beta
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdj03032
]
NCTC13534_05449
03036 Chromosome and associated proteins [BR:
sdj03036
]
NCTC13534_05449
03400 DNA repair and recombination proteins [BR:
sdj03400
]
NCTC13534_05449
DNA replication proteins [BR:
sdj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC13534_05449
Chromosome and associated proteins [BR:
sdj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC13534_05449
DNA repair and recombination proteins [BR:
sdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC13534_05449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF4777
Hs1pro-1_C
Motif
Other DBs
NCBI-ProteinID:
VTQ08048
LinkDB
All DBs
Position
1:complement(4575680..4575967)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKAEIIAEISNKTGLEKVDVQETVEAFFKVVKSAMIGGENVYVRGFGSFVVKKRAEKTA
RNISKNTAIIIPEHYVPSFKPAKVFVEKVKNGNKK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagaaattattgcagaaatctctaacaagactggtttagagaaggttgat
gtacaagaaaccgttgaagcattcttcaaagtagttaaaagcgctatgattggcggtgag
aatgtttacgtaagaggttttggaagttttgtggttaaaaagagagccgaaaaaacagca
cgtaacatctctaaaaacacagctattatcattcctgagcactatgtgcctagcttcaaa
cctgcaaaagtatttgtagaaaaagttaaaaacggtaataaaaaataa
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