Shewanella dokdonensis: KHX94_00310
Help
Entry
KHX94_00310 CDS
T07469
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk03030
DNA replication
sdk03430
Mismatch repair
sdk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KHX94_00310
03430 Mismatch repair
KHX94_00310
03440 Homologous recombination
KHX94_00310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdk03032
]
KHX94_00310
03400 DNA repair and recombination proteins [BR:
sdk03400
]
KHX94_00310
Enzymes [BR:
sdk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KHX94_00310
DNA replication proteins [BR:
sdk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KHX94_00310
DNA repair and recombination proteins [BR:
sdk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KHX94_00310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
QVK23315
UniProt:
A0ABX8DG18
LinkDB
All DBs
Position
complement(46358..47032)
Genome browser
AA seq
224 aa
AA seq
DB search
MSLWQQLSLAWRAQGASPLLREYYQSLRPLLQQSLADVPLIAIDMEMTGLNPQQNQIISV
GLVPLTQRQLPLAMAAHQLVGISGSVGQSAIIHGIVDRHLQEQSLEQQQLLPWLLRQVMG
KLMIFHHAPLDLAFLSTLMQRTNGTSMRFPVVDTLQIERRRLLRECHILPQGCLRLGACR
QRYHLPVYAAHNALMDAIACGELFLAQTASINPDVAVAEFLWWP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtggcaacagctatctctggcgtggcgagcgcagggcgcttctccactgtta
cgggaatactatcagagcttgcgccccttactgcaacagtcgctggctgacgtgccatta
atcgcgattgatatggaaatgacggggctgaacccgcagcaaaaccagattatttcggta
gggctagtgccattaacacaacggcaattaccactagcaatggctgcacatcagttggtg
gggatcagtggcagtgtcggccaaagtgccatcatccacggtattgtcgatcgccattta
caggaacaatcgttggagcaacagcagttattgccttggctattgcggcaggtcatgggc
aagttaatgatcttccatcatgccccgttggatctggcatttttatccacattaatgcag
cgaaccaacggtacaagcatgcgtttcccggtggtagacaccttacaaattgaacgccgc
cgcttgttacgtgaatgtcatatactacctcagggatgtctgcggctgggtgcctgtcgg
caacgctatcatctacctgtttatgcagcacataatgccttgatggatgccattgcttgc
ggtgaactgttcttagcacaaaccgcttcaatcaacccagatgtcgcggttgctgaattt
ttatggtggccatag
DBGET
integrated database retrieval system