Shewanella dokdonensis: KHX94_00315
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Entry
KHX94_00315 CDS
T07469
Name
(GenBank) cyclic nucleotide-binding/CBS domain-containing protein
KO
K07182
CBS domain-containing protein
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
KHX94_00315
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF294
DUF294_C
CBS
cNMP_binding
PHA_synth_III_E
Motif
Other DBs
NCBI-ProteinID:
QVK23316
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Position
complement(47034..48881)
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AA seq
615 aa
AA seq
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MDESELLPIRNFLAEIAPFNELPSELLEECCRSLSIGYYSKMSGAVPLSSENPMLYIVRS
GAFEVRNAEGELVDRLGAGDYFGFPSLMSGESISNKVLILEDGLVYHLTLALFDKLRAGS
RAFDRFFNRAYAKRLRHQDAQHQRELLTANRISSLMVMAPVSVDHHTPVSDAAKLMRQHR
VSSALVVNNQQLVGILTDRDLRNRVLAEELGGHVPVSQAMTSAPVTIDANALVFEAMLQM
SQHNIHHLPVLDNGQPVGMVTSTDIIRSQSSQPILLIGEIERQQDVASLIHVSKQIPLLL
QNLISADARAEEIGRILTSVTDALTRRLIQLNQALLGEPPIAFCWLAFGSQGRQDQMACS
DQDNGLLLAEEPDSSATAYFDALTHAVCSGLNDCGYVFCPGDIMAQNPAWRMSLENWQQK
FSNWVNTPDPKALMHASIFFDMRCVFGPAPLFAALQDKVLADTQDNDIFLAALTGNALSE
SPPLGFFRQFVLERDGSEEKGIDLKHRGSVLINDIARVYALSSGLKEVNTAKRIRVLIAN
GILTRKDGLNLADALEFIAHMRLANQGRQYENREALSNYLRPQALSSLMRHQLRDAFKVV
HDAQAALKLKFMRSF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaagtgaactgttgcccattcgtaatttcctggccgaaattgccccgtttaat
gaattgcctagcgaactgctggaggagtgttgccgcagccttagtatcggctactacagt
aaaatgtcaggtgccgtaccgctgagttctgaaaatcctatgctgtacattgtgcgcagt
ggtgcctttgaagtgcgtaatgccgagggcgaattagtggataggctgggggccggagac
tactttggtttcccatcgttaatgtcaggtgaatctatcagtaataaagtgctgatctta
gaagatgggttggtatatcacctgacattagccctgtttgacaagttacgagcaggcagc
cgggcgtttgaccgcttttttaaccgggcctatgccaagcgtttacggcaccaagatgca
caacaccagcgcgaattactaaccgctaatcgtatcagcagtttgatggtaatggctccg
gtgagtgttgatcatcatacccccgtcagtgatgccgccaagctgatgcgccagcaccgc
gtttcttcagcattggtggtcaataatcagcagttggtcggaatactaactgacagagac
ttacgcaatcgggttttggccgaggagcttggcggccatgtgccagtgtctcaagccatg
acttcggcaccggtaaccattgatgcaaatgccttggtatttgaagcaatgttgcagatg
agccagcataatatccaccatttacccgtattggataatggtcagccagtggggatggta
accagtaccgatattatccgcagtcaatcttcacaacccatactcttgattggtgaaata
gagcgacaacaggatgttgccagtctgatccacgtcagtaagcagatcccattgttattg
caaaatcttatcagtgctgatgcgcgggcggaggaaattggccgtattctgaccagtgtt
acggacgcattgacccgacggctgatccagttgaatcaagcgttgctgggagagccacca
atcgcattttgctggttagcgttcggaagccaaggtcgccaggatcagatggcttgctca
gatcaggacaatggcctgttactggcagaagaaccagactcatcggctaccgcttacttt
gatgcactgacacacgccgtgtgcagtgggcttaatgactgtggttatgtgttctgtccc
ggcgatattatggcgcaaaatcctgcgtggcgaatgtcattggaaaactggcagcagaag
ttttctaactgggtgaatacgcccgatccaaaggcgttaatgcatgccagtattttcttt
gatatgcgttgtgtcttcggcccagccccgctgtttgcggcattgcaagacaaagtcctg
gccgatacccaggataatgacattttcctggcggcgttaacggggaatgcgttaagcgag
tcacctcctctggggttctttcggcaatttgtgctggaacgtgatggctctgaggagaag
ggcatagatcttaagcatcggggcagcgtcttgatcaacgacatcgcgcgcgtatatgcg
ctgtcgagtggcctaaaagaagtcaacacggcaaaacgtattcgggtgttgattgctaac
ggcattcttacgcgcaaagacggacttaatctggccgatgcactggagtttattgcgcat
atgcgactggcgaaccaaggccgccaatatgagaatcgtgaagcgctcagtaattatctc
aggcctcaggcattatcgtcgctgatgcggcatcagttacgagatgcttttaaggtggtt
catgatgcccaagcagcgctaaagcttaaatttatgcggagcttctga
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