Shewanella dokdonensis: KHX94_01270
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Entry
KHX94_01270 CDS
T07469
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdk03009
]
KHX94_01270 (rluB)
Enzymes [BR:
sdk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
KHX94_01270 (rluB)
Ribosome biogenesis [BR:
sdk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KHX94_01270 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QVK23451
LinkDB
All DBs
Position
complement(264598..265455)
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AA seq
285 aa
AA seq
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MSEKLQKILARAGHGSRREMEAWIAAGRVSVDGVIANLGDRIEADAKVRIDGRQVSLKSA
DEVICRVLAYHKPEGEICSRKDPEGRPTVFDRLPRTRDSRWVAVGRLDINTSGLLLFTSD
GELANRLMHPSNEVEREYAVRTFGEVSDLVVQKLRTGVMLEDGPAQFDQIKSAGGEGINQ
WWHVALHEGRNREVRRLWEAVEVQVSRLIRVRYGMIELPKTLPRGGWMELPLEQVNYLRQ
IAGLEPETRSMLGMDKHSVARAKVRSAKVRRAVRKQKTTQGKPTR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattgcagaaaatcttggcccgtgctggccatggctcccgtcgtgagatg
gaggcatggatagctgcaggccgggtgagtgtcgatggtgtaattgctaatctgggcgac
cgcattgaagccgacgccaaagtacgtatcgatggtcgccaggtatcgctcaagtctgcc
gacgaagtgatctgtcgcgtgctggcttaccacaaaccggaaggggaaatctgttcccgt
aaagatccagaaggtcgtccaaccgtatttgatcgactgccgcgtacccgtgatagccgc
tgggttgctgtagggcggctggatattaacacctcaggtttgttgctgttcacctcggat
ggtgaattggcgaatcgcttgatgcatccttctaacgaagtggagcgtgaatatgcggtg
cgcacctttggtgaagtcagtgatctggtggtgcagaaactgcgtactggcgtgatgctg
gaagatggcccagcacagtttgatcaaatcaaatcagccggtggcgaaggcatcaaccag
tggtggcatgtggcgttacatgaaggccgcaaccgcgaagtgcggcgcttgtgggaagcg
gtagaagtgcaagtcagccgtttgatccgggtgcgttatggcatgatcgagttgcctaaa
actttgccccgtggcggttggatggaactgccattagagcaggtgaactatctgcggcaa
atcgctgggttagagccagaaactcgctccatgctgggaatggataaacacagtgtcgcg
cgggccaaagtgcgcagtgccaaagtccgccgtgcggtgcgcaagcagaaaactacccaa
ggaaaaccgactcgataa
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