Shewanella dokdonensis: KHX94_01610
Help
Entry
KHX94_01610 CDS
T07469
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
sdk
Shewanella dokdonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
HTH_31
HTH_23
HTH_IclR
HTH_11
HTH_Tnp_ISL3
HTH_Crp_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QVK23502
LinkDB
All DBs
Position
342349..343131
Genome browser
AA seq
260 aa
AA seq
DB search
MSKTRQKRLIPALTELPRPIYARAESWSDNGSQTEWHCHPWGQLSYALSGILVVNTRRGR
YVAPPQYAIWLPAHEQHEVVSGGAAVMRSLYVDSNQLSQPRWQQPLVCEITPLVRELIIQ
FSVNPAEYAPATAAARLAQVLLDQLAQLPSAPLQLPMPEDRRLQTLCQQLQVEDQQLPLA
QLASRLGLSDRSVSRLFKAETGMTFRQWRRALRLFKALEALRDGKAVTTVALDCGYDSVS
AFVSAFREQFGKTPGQYFKQ
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaacaagacaaaaacgtttgatcccggccttgactgagttgccgcgccctatt
tatgcgcgtgccgaatcttggagtgataacggcagtcagaccgagtggcattgtcatccc
tggggccaactgtcttatgccttgtctggtattttggtggtcaatacccgtcgcggccgt
tatgtggcaccgccgcaatatgccatctggcttcccgcacacgaacagcacgaagtagtc
tctggcggcgcagctgtgatgcgcagtctatatgttgacagcaaccaactatcgcaacca
cgttggcagcaaccactggtatgtgaaattaccccgctggtgcgcgagttgatcatccaa
ttcagtgtcaacccggcagaatatgccccagcaacggcggcggctcgcttagcacaagtg
ctattggatcaattggcgcaactgccctcagcgccattgcaattgcccatgccggaggat
cggcgcttgcaaacgctgtgtcagcagttgcaggtagaagatcaacaacttccgctggca
caactggcttccaggctggggctaagcgatcgcagtgtcagccgtttattcaaggcagaa
actggcatgaccttccgccaatggcgacgggcattacggctctttaaagcgctagaagcc
ttgcgggatggcaaagcggtcaccacggtggcattggactgtggttatgattcggtatcc
gcttttgtatcggcctttcgcgaacagtttggtaaaacgccgggacagtatttcaagcag
tga
DBGET
integrated database retrieval system
