Shewanella dokdonensis: KHX94_02685
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Entry
KHX94_02685 CDS
T07469
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00521
Streptomycin biosynthesis
sdk00523
Polyketide sugar unit biosynthesis
sdk00541
Biosynthesis of various nucleotide sugars
sdk01100
Metabolic pathways
sdk01110
Biosynthesis of secondary metabolites
sdk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KHX94_02685 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KHX94_02685 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KHX94_02685 (rfbC)
Enzymes [BR:
sdk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KHX94_02685 (rfbC)
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Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
THAP
Motif
Other DBs
NCBI-ProteinID:
QVK23651
LinkDB
All DBs
Position
complement(568273..568818)
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AA seq
181 aa
AA seq
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MRVVATNIPDVKIIEPEIFGDTRGFFMESWREDWFNQNVCERHFVQDNHSKSYRGTLRGL
HYQTENTQGKLARVVIGEVFDVAVDMRKTSATFGQWVGVLLSAENQRQLWVPEGFAHGFY
VTTETAECLYRCTDYYNPQAEHSVRWDDPELAIKWPLLNGEMPSLSVKDKNAQWFKNAVT
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagagttgttgcgaccaacatccctgatgtaaaaataatcgagccagagattttcgga
gatactcgcggttttttcatggaatcctggcgtgaagattggtttaaccaaaatgtatgt
gaacgccattttgttcaggataaccattcaaaatcctatcggggtactctacgaggtctt
cactatcaaacagaaaatactcagggcaaattggctcgtgttgttattggtgaagtgttt
gatgtggcagtagatatgcgcaagacttccgctacctttggtcagtgggtcggtgtgcta
ctttctgcagaaaatcaaaggcaattatgggtgccggaagggttcgctcatgggttctat
gtgacaactgaaacagcagaatgtctttaccgctgtactgactactacaacccacaagcg
gagcactccgtccgttgggatgatcctgaacttgccattaaatggcctttgctcaacggt
gaaatgccgtcattatccgtaaaagataaaaatgctcagtggtttaaaaatgccgttaca
ttttga
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