Shewanella dokdonensis: KHX94_03505
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Entry
KHX94_03505 CDS
T07469
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00280
Valine, leucine and isoleucine degradation
sdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KHX94_03505
Enzymes [BR:
sdk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
KHX94_03505
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
RimK
HlyD_D23
GARS_A
ATPgrasp_ST
InlK_D3
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
QVK23770
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Position
728887..730926
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AA seq
679 aa
AA seq
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MTDASIRKLLIANRGEIACRIIRTCQRLGIRTLAIHSAVDRQALHVSLADEAIALSGDSP
LAPYLNIDAIIDAAKRYGADAIHPGYGFLSENAAFASACSAHGLIFVGPPASAIDAMGSK
SAAKAIMAAAGVPLVPGYHGAEQASGFLQQQALTIGFPLLIKATYGGGGKGMRVVTNASE
FTTALAAAKREAKAAFADDTVLLERYLTQPRHIEVQIFADQQGHCIYLGDRDCSLQRRHQ
KVIEEAPAPGLSDELRQQMGQAAIAAAKAIGYCGAGTIEFLLDSDQQFYFMEMNTRLQVE
HPVTELITGQDLVAWQLSVAAGQPLPLTQQQVTLNGHAVEARIYAEDPSHNFLPASGPLS
YLQEPTAAPHLRLDTGVRQGDVITPFYDPLIAKLIIWHSDRSEALRQLTLALQQYQIAGV
WHNIAFLAALTSHPAFIREDFSTHFIAQHLDELLSQAATPAPTTEVLAAAAMVSLLASNT
QGHTYNSPWQQLSGFRLNAAPEWHLQLRYGAMATASSFLLLLQQQTIGEYSLTINAAEAE
GNANTKVIVSGELTAAQQLKLTLNGHSQHWYFYQQQTTLWLLRHGHVWQFDSGPQSYQLA
DNHGDTSLLAPMNGTIVTLLVQPGDFVRKGCGLLVLEAMKMEYQINAPTDGIVDNFLCRA
GELVQDGTLLVQFSAKESD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccagtattcgcaagttattgattgccaatcgcggtgaaattgcctgccgc
attatacgaacctgccaacgattggggatccgtaccctggccatccattctgcggttgac
cgtcaggcattacatgtcagccttgccgacgaagcaatagcactgagcggtgattctccc
cttgcgccttatctgaatattgatgcgattatcgatgcggcaaagcgctacggtgccgat
gccatccatcctggatacggctttctctcagaaaatgccgcattcgccagcgcctgtagc
gcgcatgggctgatttttgtggggccgcccgccagcgccattgacgccatgggcagtaaa
agtgccgccaaagcgattatggctgctgctggcgtccccctagtgccgggttatcacggt
gcggaacaagcgagtggttttctgcaacagcaggcgttaaccattggctttccactgttg
atcaaagccacttatggtggaggcggtaagggaatgcgggtggtgacgaatgcgtcagaa
tttaccacagcgctggccgcagctaagcgggaagccaaggccgcctttgccgatgacacc
gtattgctagagcgctatctgacacaaccgcggcacatcgaagtacaaatatttgccgat
cagcaaggccactgcatttacttaggcgatcgtgattgttcgctgcaacgtcggcaccag
aaagtcattgaagaagcgccggccccgggtcttagcgatgaactcaggcaacagatgggg
caagcggcaatcgcagcggctaaagccatcggctactgcggtgccggcaccattgagttt
ctgctggatagcgaccagcagttttacttcatggagatgaatacccgtttgcaggtggaa
catccggtgaccgaactgatcaccggtcaggatctggtggcctggcagctaagcgtggcc
gctggtcagccgctgccattaacacagcagcaagtcacacttaacggccatgccgttgaa
gcccgaatttatgctgaagatcccagccataactttctccccgcttccggcccgctgtct
tatttacaggagccaactgcggcgccccatttacggttagataccggggtacgccaaggc
gatgtgatcacccctttttacgatccgttgatcgctaaattgatcatctggcactccgac
cgtagcgaggcgctgcgacaattgacgctggcattacagcagtatcagatagccggagtg
tggcataatattgcgtttctggccgcactaacatcacatccggcctttatccgcgaagat
ttcagcacccattttattgcgcagcaccttgatgaattgttgtcacaagcggccacaccc
gcgccaaccactgaggtacttgcagccgctgccatggtgagtctgctggcatctaacacc
caaggtcacacttataactccccttggcagcagttgtcaggatttcgactgaacgcggcg
ccagagtggcatttacagttgcgttatggtgcgatggcaactgcctcaagtttcctctta
ctgctacagcagcaaactattggtgagtattcactgaccatcaacgccgcagaagccgag
ggaaatgccaacactaaagtaatcgtcagtggcgaattaaccgcagcacaacagctcaaa
ttgacgctcaacggccatagccaacattggtatttctaccagcaacagacaacactgtgg
ctattgcgtcacggtcatgtctggcagtttgatagcggccctcagagttaccagcttgcc
gataatcatggcgatacgtcgttactggcaccgatgaatggcacgatcgtgaccttgctg
gtgcagccgggcgattttgtccgtaaaggctgcggcttattggtactggaggcgatgaaa
atggaataccagatcaacgcgcctactgatggcattgtcgataattttttatgtcgtgct
ggtgagttagtgcaagacggaacgctgttagtccagttcagtgctaaggagtctgactaa
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