Shewanella dokdonensis: KHX94_03510
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Entry
KHX94_03510 CDS
T07469
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00280
Valine, leucine and isoleucine degradation
sdk00650
Butanoate metabolism
sdk00907
Pinene, camphor and geraniol degradation
sdk01100
Metabolic pathways
sdk01120
Microbial metabolism in diverse environments
sdk04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KHX94_03510
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KHX94_03510
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KHX94_03510
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KHX94_03510
Enzymes [BR:
sdk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
KHX94_03510
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
HypF_C_2
Motif
Other DBs
NCBI-ProteinID:
QVK23771
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All DBs
Position
730926..731846
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AA seq
306 aa
AA seq
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MYPASIRIYEVGPRDGLQNERPVAIRDKVQLLNALANAGLCHIEAGSFVSAKWVPQMADS
AAVFGQITRRAGVSYSALTPNLAGFEAALAAGVDEVAIFTAASERFCQRNINCSISESLA
RFVPIVDKAKHYGIPVRGYVSCVLGCPYEGEVAPQQVAAVAEELQQLGVYEISLGDTIGV
GTPQKARNMLDTVANKVPIAQLALHFHDTYGQALANILACLDSGISTLDASVAGLGGCPY
AQGASGNLATEDLVYMLHGLGIHTGVDLPKLARAGAQISRVLKRHNGSKVGQVLTAELAP
PAQEYS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctgcttccatccgtatctatgaagttggcccgcgtgacggcctgcaaaatgaa
cggccggtggctatccgcgataaggtgcaactgcttaatgccttggccaacgcagggcta
tgtcatatcgaagcgggtagttttgtctcagcgaaatgggtaccgcaaatggcggactct
gccgcagtattcgggcagataactcgccgtgctggagttagctactcggcgctgacaccc
aatcttgccggatttgaggccgcactcgctgccggagtagatgaagtggccatttttacc
gccgcctcagagcgcttttgccagcgtaatatcaattgcagtatcagtgaatcgcttgcg
cgctttgtgccaatagtggacaaggccaaacactatggcatcccagtacgtggctacgtt
tcctgcgtgctcggttgtccctatgagggcgaggttgcgccgcagcaggtggctgccgtg
gcagaggaattacagcaactgggtgtgtatgaaatctccctcggtgacaccattggcgtt
ggcacgccccaaaaagccagaaacatgttagacaccgttgccaacaaagtgccgatagcc
caattagcgctgcattttcacgacacttatggtcaggcactagcgaatattctggcctgt
ctcgatagcggaattagcacactcgatgcctcagttgcgggccttggcggttgcccttat
gcccaaggggcttccggcaatctagcgaccgaagatctggtgtatatgctgcacggttta
ggcattcatacaggcgtggacttacccaagttggctcgtgctggtgcgcagatcagtcgg
gtactcaaacgtcataatggcagcaaggtcggccaggtgttaaccgccgaactggcccca
ccagcacaggagtacagctaa
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