Shewanella dokdonensis: KHX94_03755
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Entry
KHX94_03755 CDS
T07469
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00260
Glycine, serine and threonine metabolism
sdk00460
Cyanoamino acid metabolism
sdk00630
Glyoxylate and dicarboxylate metabolism
sdk00670
One carbon pool by folate
sdk00680
Methane metabolism
sdk01100
Metabolic pathways
sdk01110
Biosynthesis of secondary metabolites
sdk01120
Microbial metabolism in diverse environments
sdk01200
Carbon metabolism
sdk01230
Biosynthesis of amino acids
sdk01240
Biosynthesis of cofactors
sdk04981
Folate transport and metabolism
Module
sdk_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KHX94_03755
09102 Energy metabolism
00680 Methane metabolism
KHX94_03755
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KHX94_03755
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KHX94_03755
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KHX94_03755
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KHX94_03755
Enzymes [BR:
sdk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KHX94_03755
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QVK23802
LinkDB
All DBs
Position
complement(786284..787537)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKKSMNIADYDAELFQAIEDENRRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVENLAIDRAKQLFGATYANVQPHSGSQANYAVYMALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLFNIIPYGVDAQGKIDYAELETLALEHKPKMIIGGFSAYSGI
VDWAKLREIADKVGAFLFVDMAHVAGLVAAGVYPSPIPHAHVVTTTTHKTLAGPRGGLIL
SAADDEDLYKKLNSAVFPGSQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVTNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRELTGKEADAALGHANITVNKNSVPNDPRSPFVTS
GIRIGTPAITRRGFKEAEAKLLTGWICDVLDNASDEAVIATVKAKVLELCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagagtatgaacatcgccgattatgatgcggagctgttccaggctattgaa
gatgagaaccgtcgtcaggaagaacacattgagctgatcgcttccgaaaactacaccagt
ccacgggtcatgcaggcccaaggctcgcagttaaccaacaagtacgccgaaggctaccct
ggcaagcgctactatggtggttgtgaatatgtggatgttgtagaaaaccttgcgattgac
cgtgctaaacagctgtttggtgccacttacgccaacgtgcagccgcattcaggttcgcag
gcaaactatgccgtttatatggcattgttacagcctggcgacactgtgttggggatgaat
ctggcccacggcggtcacttgactcatggctctccagttaacttctctggcaagctgttc
aatattattccttacggtgtagatgcacagggcaagattgattacgccgaactggaaacc
ttggctttggaacataagcctaagatgatcatcggtggtttctcggcttactccggtatc
gttgactgggccaaattgcgcgaaatcgctgataaagtgggcgctttcctgtttgtggat
atggcacacgttgctggtctggtggccgcaggtgtttaccccagcccaatcccacacgca
catgtggtgacaaccactactcacaaaacattggccgggccacgcggtggtttgatcctg
tctgccgccgatgatgaagatctgtataagaaactcaactctgcggtattccctggtagt
cagggtggcccactgatgcacgtgattgccggtaaagcggtggcatttaaagaagcgctg
gaacctgaatttaaagcttatcagcagcaggttgtgaccaacgccaaggccatggttgag
gtgtttctggaacgtggctacaagatcgtttctggtggtactgacaaccatctgatgctg
gtagatctcatcggtcgtgaactgaccggtaaagaagccgatgctgcccttggccatgct
aacatcacggttaacaagaactcagtgcctaacgacccacgttcaccttttgtgacttcc
ggtatccgtattggcacacctgccattacccgccgcggtttcaaagaagcagaagccaaa
ctgctgactggctggatctgtgatgtcttggataacgccagtgatgaagccgtcattgct
acagtcaaagccaaagtgctggaactgtgcgcccgcttccctgtttacggttaa
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