| Entry |
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| Name |
(GenBank) sigma 54-interacting transcriptional regulator
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| KO |
| K15836 | formate hydrogenlyase transcriptional activator |
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| Organism |
sdk Shewanella dokdonensis
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| Brite |
KEGG Orthology (KO) [BR:sdk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:sdk03000]
KHX94_04030
Transcription factors [BR:sdk03000]
Prokaryotic type
Helix-turn-helix
Other families
KHX94_04030
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
846293..848389
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| AA seq |
698 aa
MAQRFQYLSEQKSCLRLTHQLLDQASVETMLQSLNQHFVETGLPYDCSVLVDGPMAAPRL
YLQADDGNVCCFDEASLLQNGPLRIVQASRTVLHLSCEDYRQRYPRLSVSIRPQAFGDYL
ALPILNHRRLMGLLEITRHDTDAFDDDDIAHLELVAESMGVALEHLQSRLALSFEQGQLC
EERDDFHVLVNVTNAVITERSVESLVDKIAREIHCYFGISAISVCLPETDPNNLTLYNAF
FVQPGKPQEAQIHISASRSICQQVLESGEIQLRQLSKDEPLACNETQLFNLWPAESHLLC
LIPIKFAGQVLGVLKLAQADEACFKGSRLQLLAQVAERTAIAVDNARAYQEINRLKDHLV
QENNYLSEQVESLSHQQFDEIIGRSKSITEVLKQVELVAKTDCSVLLLGDTGTGKEVFAR
AIHRLSPRNGKRMIKMNCAAMPAGLLESDLFGHEKGAFTGASKERMGRFELAHQSSLFLD
EVGDMPLELQPKLLRVLQEQEFERVGGNRLINVDVRLIAATNRDLKQMVTDKEFRSDLFY
RLNVFPIRLPPLSERRDDIPHLAKYFVFRASKHMGRNIDSIPSRVLRQLQEMDWPGNIRE
LQNVIERAVLLSTGHVLQLPPELGLFEAEEELQLTPHEPKPQRNAEEDDEYQRIIAVLQE
TNGIVAGPRGAAHKLGLKRTTLLSRMKRLGIDKETALV |
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| NT seq |
2097 nt +upstreamnt +downstreamnt
atggcacagcgatttcaatatcttagtgaacagaaaagctgcctgaggctgacgcatcaa
ctactggatcaagccagtgttgaaactatgctgcaaagcctgaatcagcactttgttgaa
acagggttaccttatgactgttcggtgctggttgatggcccgatggcagcaccacggctt
tatcttcaagctgatgatggtaacgtctgttgttttgacgaagcctccttattacaaaat
ggcccgttacgtattgtgcaggccagcagaaccgtgctgcatctgagttgtgaagactat
cgccagcgttatccgcgcttgagcgttagcatccgcccccaagcctttggcgactatcta
gcactgccgattttgaatcatcgtcggctgatgggactgctggaaattacccgccatgat
accgatgcttttgatgatgacgacatcgcccacctggaactggttgctgagtccatgggc
gtcgccttagaacatttgcaatcccgtctggctcttagctttgagcaagggcaactgtgt
gaagagcgcgatgatttccatgtgttggtaaatgtcaccaatgcggtgatcaccgaacgc
agcgtcgaatccttggtagataaaatcgccagagaaattcactgttactttggcatcagc
gccattagcgtttgtctgccagagacagatcccaacaatctgacactctataacgccttt
tttgtccagccggggaaaccacaggaagcccaaattcatatcagcgcctcacgcagtatc
tgccagcaggtgctagaaagtggcgaaattcagttacggcaattgtcaaaagacgagccg
ctggcctgtaacgaaactcagctatttaacctgtggcccgccgaatcacacctgttgtgt
ctgatcccgataaaatttgccggacaagtgctcggggtgctgaaactggcgcaggccgac
gaagcgtgcttcaaaggctcgcgcttacaactgctcgcacaagtggccgaacgaaccgcc
attgccgtagacaacgcccgcgcctatcaggaaatcaaccgtctgaaagatcacctagtg
caggaaaacaactatctgagtgaacaggtagaaagtctcagccatcagcaatttgatgag
atcatcggccgcagcaagtccattaccgaagtcttgaaacaagtggaactggtggcaaaa
actgactgtagtgtgctgttgctaggcgatactggcaccggaaaagaagtgtttgcccgc
gccattcatcgtctcagtcctcgcaatggcaagcgcatgataaaaatgaattgcgccgcc
atgcctgcggggttactggaaagtgatctgtttggccatgaaaaaggcgcctttaccggt
gccagcaaagaacgcatgggacgttttgaactggcccatcagagcagcctattcttagat
gaagtcggtgatatgccgctggaactgcaaccgaaactgctccgggtgttacaggagcaa
gaatttgaacgggtgggtggcaatcggctgatcaacgttgatgtgcgcctgattgccgcg
actaaccgcgatctgaaacagatggtgactgacaaagagtttcgttccgatctgttttat
cgtctcaatgttttccctatccgcttgccaccgctaagtgaacgccgcgacgatattcca
catctggcgaaatactttgtcttccgcgccagcaaacatatgggacgaaacatcgacagc
atcccatcacgggtattgaggcagttgcaagagatggactggccggggaatatccgcgaa
ttacagaatgtcattgaacgtgcagtactgctaagcacaggtcatgtgctgcaactgcct
cctgaattgggtctattcgaggccgaagaggagttacagttgacaccacatgaacccaaa
ccacagcgtaacgccgaagaggatgatgaatatcaacggattattgccgtgttgcaggaa
actaacggcatcgtcgcggggccacgaggagcagcacataaactgggcttaaaacgcaca
actctactgtcgcgcatgaaacgactgggtattgataaagaaaccgcgctggtataa |
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