Shewanella dokdonensis: KHX94_04180
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Entry
KHX94_04180 CDS
T07469
Name
(GenBank) PilT/PilU family type 4a pilus ATPase
KO
K02670
twitching motility protein PilU
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sdk02044
]
KHX94_04180
02035 Bacterial motility proteins [BR:
sdk02035
]
KHX94_04180
Secretion system [BR:
sdk02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
KHX94_04180
Bacterial motility proteins [BR:
sdk02035
]
Pilus system
Twitching motility proteins
KHX94_04180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_30
ABC_tran
AAA_7
DAP3
AAA_22
FtsK_SpoIIIE
AAA_29
AAA
ResIII
nSTAND3
AAA_19
SRP54
Acetyltransf_18
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QVK23872
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Position
complement(878920..880032)
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AA seq
370 aa
AA seq
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MDVRPFLEEMVARKASDLFVTAGFPPSAKVDGELRPLAENPFNQEQALEFVESLMTPENK
KAFHDSKECNFAIGVKGLGRFRVSAFWQREAAGCVMRRIEIRIPTMEELSLPAILRDLVM
SKRGLVIMVGGTGTGKSTSLAALIGYRNENSKGHILTIEDPIEFVHQHRKSIITQREVGI
DTESFDAALKSSLRQAPDVILIGEIRSQETMEFALSFAETGHLCMATLHANNANQALDRI
MHLVPESKHRQLLFDLSLNLRGIVAQQLIPKADGSGRRAAIEILINTPRVASIIQNNELH
LLKETMAKSNEQGMQTFDQALFKLFNDGEITYAEALRHADSPNDLRLMIKLQSGTTGSAG
SMEGVTLDMD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcagaccttttcttgaggaaatggtagcgcgtaaagcctccgacctgtttgta
acggcggggttcccgccaagcgccaaggtagatggggagctgcggccattagccgagaat
ccgtttaaccaagagcaggcgctggaatttgtagagtcattgatgacgccggaaaacaaa
aaggcgtttcatgacagcaaggaatgtaattttgcgattggcgttaaaggcttagggcgc
ttccgtgtcagcgctttctggcagcgagaagccgcaggctgtgtaatgcggcgcattgaa
atccgtatccccaccatggaagaactcagtttacccgccattctcagagatctggtgatg
agtaaacgggggctggtgatcatggtcggtggtactggtacgggtaaatctacctcgctg
gcagcactgattggctaccgtaatgaaaattccaaaggccatatcctgactattgaagac
cccatcgaatttgtgcatcagcatcgcaagagcattattacccagcgcgaagttggcatt
gataccgaatcttttgatgcggcactgaaaagttcgttgcgacaggcgccagacgtgatt
cttattggcgaaatccgtagtcaggaaaccatggagtttgcactatctttcgctgaaacc
ggccacctgtgtatggctaccttgcacgccaataatgccaaccaggcgctggatcgcata
atgcacttggtgccggaaagtaagcatcggcaattgttatttgatttgtctttgaattta
cgtggcattgtggcgcagcaattgatccccaaggcggatggtagcggccgccgcgccgcc
attgaaatcctcatcaacacgcctcgcgttgccagtatcattcaaaacaatgagttacat
ctgctgaaagaaactatggcgaaatcgaatgagcagggtatgcaaaccttcgaccaggcg
ttgtttaagttatttaatgatggcgagatcacctatgccgaagccttacgccatgccgat
tcgcccaacgatttgcgcctgatgatcaaactgcaaagtggcacgactgggtcggcgggt
tccatggaaggtgtgacgctggatatggattga
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