Shewanella dokdonensis: KHX94_05850
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Entry
KHX94_05850 CDS
T07469
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_05850
Transporters [BR:
sdk02000
]
Other transporters
Pores ion channels [TC:
1
]
KHX94_05850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QVK24761
UniProt:
A0ABX8DJR1
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Position
1213384..1215609
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AA seq
741 aa
AA seq
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MLSLAILSALVTSQAALADESGNIEKITVMGEKNRRSMQDTAASVDVTTALKLEQENIQS
LYDILNKTPNISQMYGNRGFTIRGISSESGADNPLASIYMDDVPLPSQISDTGPSDLWDV
AQVEVLRGPQSTIQGENALAGAVVIKTEDPTMDWSGRARLQWSNPDDKRMSIAVGGPLID
DELAFRFAADKRLFEGFTDNITRGGTEDELNSLMLRGKLLWTPKAVDGLKVLLSYTRDNR
DGPYMFTYNQLDLPGRVNTSNRENRSDAVTDLASLNVNYQLNDYWQFSSVTSYSKSDVDR
VYDVDLRAADSNYGTQTNNYKVFTQELRANYQGEALSGLLGLYAAKHDNHSLLSTLSNLD
TPVTTIATLLQGYGLDSGSASTVATLYGAALPQIPVDYLSLNDSTSENQALFADMEYRLN
SRWSLQAGFRYDHQQYRFSSDTDSRFAGVLPDPTLFGADGSLLYQLVGGINSAVLGLVAQ
ASGSSPETTTTTDTFLPKIGARFNIDDDTSITATYQRAYRSGGSSLNIARSSVVAYDPEY
TDNYELAWRQSLPSIDGVFNANLYYVNWKDKQVTANFGLNSYDYNTVNAGKAHLYGIEMS
FKQQLTADIDGYLSYSYSRTKFDQFDSVMNGTTTSYAGEEFSYAPNHTVAAGVNVYFTDH
LSWNLNANYRSKVYTDMALDRTRVSSRTLVNTRLAYDNGDWSTYLFANNLFDQDYVQYLR
DDVDAISGAPRVIGIGAELRW
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcactcgccatattaagcgccttggtcacgagccaagcggcattggccgatgag
agtggcaatatcgaaaaaattactgtcatgggggagaaaaaccgccgttccatgcaagat
accgcagccagcgtggatgtcactaccgcgctgaaactggagcaggagaatatccagtcg
ctatacgacattctcaataaaacccctaatatttcccagatgtacggcaaccgcggtttt
accatccgcggcatcagcagcgaatcgggtgccgataacccgttggcctccatttacatg
gatgatgtgccactgcccagtcagatcagtgataccggccccagcgacctctgggacgta
gcccaggtagaagtgctacgagggccgcaatccaccattcagggagaaaatgccctagcg
ggcgcggtagtgatcaaaaccgaagatccaactatggactggagcggtcgagcgcggctg
caatggtccaatcccgatgataaacgcatgtccattgccgttggcgggccactgattgac
gatgaactggcattccgttttgccgcagacaagcgcctgtttgaagggttcaccgacaac
atcacccgaggcggcaccgaagatgaactcaattcgctgatgctaagaggtaaactgctg
tggacacccaaagcggttgatggcttgaaggtactgctcagttatacccgggataatcgc
gatggcccgtatatgtttacctataatcaactggatcttcccggcagagtgaatacctca
aaccgcgaaaatcgctccgatgccgtgacagatctggcctcgttaaatgtgaattatcag
ttaaacgactactggcagttctcttctgtcacctcctacagcaaatctgatgtggatcgt
gtctatgacgtcgacttacgtgcagcagacagtaactatgggacacagacgaacaactac
aaagtcttcacccaagaactacgggccaattatcaaggcgaagccctgagtggtctgctg
gggctctatgccgcgaaacatgataaccatagcctgctcagcacactgagtaatctggat
accccggtaaccactatcgccacattgttacagggatacggtctcgatagcggttcagcc
agcacagtcgccacactttatggtgccgccttgccacaaattccggtcgactatctgtcg
cttaatgacagcacgtcagaaaaccaagcgttgttcgctgatatggagtatcgcttgaat
agtcgctggagtctgcaagcgggctttcgttatgatcaccaacaataccgtttcagttcg
gatacagattcccgctttgccggggttttgcccgacccgaccctatttggtgcagatggc
agcctgttgtatcaattagtaggtggcatcaacagcgccgtattgggcttagtagcacaa
gccagtggcagcagtccggaaacaacaacgaccacagataccttcttgcccaagattggt
gcccgcttcaatattgacgatgatacgtccattaccgccacttaccagcgggcctaccgc
tcaggcggtagcagtctcaatatcgcccgcagtagcgtcgtcgcctatgatcctgaatat
acagataactatgagctggcttggcgccaatctctgccgtctattgatggagtgtttaac
gctaacctgtattacgtcaactggaaggacaaacaggtcacggctaattttggtcttaac
agttacgattacaacacggtcaatgccggaaaggcgcacctgtatgggatagaaatgtcc
ttcaaacaacagctaacagcagatatcgacgggtacttgtcatacagttattcgagaacc
aaattcgaccaatttgactctgtgatgaatggtacaacaaccagttatgccggtgaggag
tttagttacgcccccaaccatactgtcgcggccggggtaaatgtgtatttcaccgaccat
ctcagttggaacctcaatgccaactaccgcagcaaggtgtataccgatatggcactcgat
cgcactcgggtgtcatcacgcacgctggtgaatacacgcctcgcttatgataatggcgac
tggagcacctacctgtttgccaacaacttgttcgatcaggattatgtgcaatatctgcgt
gatgatgtcgatgccatatccggcgcaccacgagtgattggtatcggggcagagctccgc
tggtaa
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