Shewanella dokdonensis: KHX94_06270
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Entry
KHX94_06270 CDS
T07469
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00470
D-Amino acid metabolism
sdk01100
Metabolic pathways
sdk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KHX94_06270 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KHX94_06270 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdk01011
]
KHX94_06270 (alr)
Enzymes [BR:
sdk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
KHX94_06270 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdk01011
]
Precursor biosynthesis
Racemase
KHX94_06270 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
QVK24177
LinkDB
All DBs
Position
complement(1299824..1300900)
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AA seq
358 aa
AA seq
DB search
MKPFPRAEISSQALKHNLERLREVAPHSKVIAVVKANGYGHGLLNVANSVPDANGFGLAR
LEEALEMRKGGVKAKLLLLEGFFRSEDLPLLVEHNIDTAVHHESQLQMLEQAHLDKPVTV
WMKLDTGMHRLGFSPAQFHEVYQRLLRCPQVAKPINFMTHFACADELQKDYTAKQLAIFN
ELTQNLPGERTTANSAGTLFWPESQADWIRPGIALYGVSPVDGDRGAKHGLIPAMTLVSQ
LIAVREHKAGDTVGYGGHWQASRDTRLGVVAIGYGDGYPRNALQGTPVWINGRRVPIVGR
VSMDMLTVDLGPNATDKVGDAAVLWGPQLPVEEVAEKIGTFAYELVTKLTPRVAVCLD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccctttcccagagctgaaatcagcagtcaggcgctcaaacataatctggaacgc
cttcgagaagtcgctcctcacagtaaagtgattgccgtcgttaaagctaatggctatggc
catggccttttgaatgtcgcgaatagtgttccagatgctaatggctttggcttggcgcga
ctggaagaggcattggaaatgcgaaagggtggcgtcaaagctaagctattactgctagag
ggttttttcagaagcgaagatttacctctgttggttgagcataatattgataccgccgtg
catcatgaatctcagttgcagatgctggagcaggcgcatctggataaaccggtaactgtg
tggatgaagctcgataccggaatgcatcgtttaggtttttctcctgcacaattccatgag
gtttatcagcgtttgttgcgttgccctcaggttgctaaaccgattaattttatgacccat
tttgcctgtgccgatgagttacaaaaggactataccgccaagcagctcgctattttcaat
gagctgacacaaaatttacccggcgaacgcacaaccgcaaattcggcgggaaccttgttt
tggccagagagccaggctgactggatccgcccgggaattgccttgtatggcgtgtctccg
gtggatggtgatcgtggggctaaacatgggttgataccggcaatgaccttggtgtcgcag
ttaattgcggtaagagaacataaagctggtgataccgtgggttacggtggtcactggcag
gctagccgcgacacacgcctaggcgtggttgctattggctatggtgatggttacccccgt
aatgcactacaaggtacgcctgtatggattaatggccgacgagtcccgattgttggccgg
gtttccatggatatgctgaccgttgacttgggcccgaatgccaccgataaagtgggtgac
gctgctgttttgtgggggccgcaactgccagtagaagaagttgcggaaaagattggtaca
ttcgcctatgaactcgtcactaagctcactccccgtgttgccgtctgtttagactga
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