Shewanella dokdonensis: KHX94_07300
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Entry
KHX94_07300 CDS
T07469
Symbol
pilB
Name
(GenBank) type IV-A pilus assembly ATPase PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sdk02044
]
KHX94_07300 (pilB)
02035 Bacterial motility proteins [BR:
sdk02035
]
KHX94_07300 (pilB)
Secretion system [BR:
sdk02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
KHX94_07300 (pilB)
Bacterial motility proteins [BR:
sdk02035
]
Pilus system
Pilus assembly proteins
KHX94_07300 (pilB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_22
AAA_16
AAA_11
AAA_14
AAA_7
DEAD
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QVK24316
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Position
1539653..1541359
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AA seq
568 aa
AA seq
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MPTTGLHLGLSTLFIRKGLLDESRLAEAIAQSRKHKQSLVTTLVASKLLSARTIAELCYE
EYGTPLLDLAEFDVSSIPEEFLNRKLIDKHRCLPLFKRGNRLYIATSDPTNIAALEEFQF
SAGLHAEAILVEEDKLAKALDKILEEDISALDLSGIDENALAGIEVTDTDKRQDDAAESA
DDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPINLASRISAR
LKVMSKLDIAERRVPQDGRIKMKLSRNKSIDFRVSTLPTLWGEKIVMRILDSSSAQLGIE
KLGYEEDQKQAYLEMLSRPQGMILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVEI
NLEGVNQVHINIKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLST
LHTNSSAETLTRLLNMGVPGYNIASSVNLIIAQRLARRLCVECRQAEDIPEHELLKLGFS
QEQIATGFTVYKPCGCEHCSGGYKGRVGIYEVMKMSDEIARIIMEGGNSLQIARMAKEQG
MRDLRQSGLLKVVEGVTSIAEINRVTSY
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaactggtctccacctcggattatcaacgctgtttatccgtaaaggtctgctg
gatgaaagccgactcgcggaggccatcgctcaatcccgcaagcacaaacagtcactggtc
accaccttggtggccagtaaactgttatcggcgcgtaccattgccgagctgtgttacgaa
gaatacggcacgccgctgctggatttagccgagtttgacgttagcagcattccggaagaa
tttttaaaccgtaaactgattgataaacaccgctgcttaccgctgtttaaacgcggcaac
cgtttgtatattgccacctcagaccccaccaatattgccgctttggaagagttccaattt
agcgccggcttacatgccgaagcgattttggtggaggaagacaaactcgccaaagcgctc
gacaagatactggaagaggatatcagcgcgctggatctcagtggcattgatgaaaatgcc
ctcgcggggattgaagttaccgacaccgataaacgccaggacgatgcagcagaaagcgct
gatgatgcgccgatagttatctatatcaacaaaattcttaccgatgccatccgcaaaggc
gcatcggacttacattttgaaccttacgaaaaacgctaccgcatccggtttcgcattgac
ggcatattgcacgaagtctctgaaccgcccatcaacctagcatcccggatctcggcccgc
ttgaaggtaatgtcgaaactggatattgccgagcggcgggtgccgcaggatggccgcatc
aagatgaagctgtcgcgcaataagagcatcgattttcgtgtcagcaccctgcccacgctt
tggggcgaaaagatagtaatgcgtatcctcgattcctcttccgcccagttagggattgaa
aagctcggctacgaagaggatcaaaaacaggcctatctggagatgttatcacggccacag
gggatgatcctggtcaccggccccacaggttctggtaaaaccgtgtcgctttataccggg
ttgaatatcctcaataccgaagagcgcaacatctccaccgccgaagacccggtagaaatt
aacctcgaaggggtcaaccaagtccatatcaatattaaagccgggctgacctttgcctcg
gcgttgcgctcgtttctgcgtcaagaccctgatgtggtgatggtaggggaaatccgtgac
ctggaaaccgctgaaattgctatcaaggccgcccagaccggccacttagtcttatcgacc
ctgcatactaactcttctgcggagaccctcacccgtttgctcaacatgggtgtgcctggt
tataacatcgccagttcggtgaatctgatcattgcgcagcggctggcgcggcgtttatgt
gtcgagtgtcgccaagcagaagatattcctgagcatgagctgttaaagttaggtttcagt
caggaacagatagccacaggctttaccgtgtataaaccctgtggttgtgaacactgctct
ggcggttacaaagggcgggtggggatctatgaagtgatgaagatgtccgacgaaattgcc
cggatcatcatggaaggtggcaattcattacagattgcccgcatggccaaggaacagggg
atgcgcgatctacgccaatccggtttactgaaagtagttgaaggtgtgaccagtattgcc
gaaattaaccgtgtgaccagctactaa
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