Shewanella dokdonensis: KHX94_07435
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Entry
KHX94_07435 CDS
T07469
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00300
Lysine biosynthesis
sdk00550
Peptidoglycan biosynthesis
sdk01100
Metabolic pathways
sdk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KHX94_07435 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KHX94_07435 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KHX94_07435 (murF)
Enzymes [BR:
sdk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
KHX94_07435 (murF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF3693
Motif
Other DBs
NCBI-ProteinID:
QVK24329
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Position
complement(1567049..1568425)
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AA seq
458 aa
AA seq
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MIPLTLGDIATAVAGQLPSQTLAEVQINSVSTDSRNITTDCLFIALPGERFDGHDYAPTA
VSAGATALLVSKLLPLDIPQVLVADTHKALGQLGALVRNRVNPRCVALTGSNGKTSVKEM
VATILSQLAPVLYTSGNFNNDIGVPLTALRLEPQHQFAVFELGANHPGEIDYTSAIVRPE
VALVNNVGSAHLAGFGSEAGVAAAKSEIFRHLQPQGIAVINADDHYAQVMQEAAAGHQQL
TFAVDTNAQLTAANLQHDANGCYRFELHWQAQVQPVVLPLAGRHQVHNALAAAGLCLGLG
LTLTDIANGLAAMQPVKGRMQPKPLGRFMLVDDSYNANPNSVTAAINWLQEIDGNRILVL
GDLGELGDNAAPLHRELGERARKAGIDALFCCGELTKHTSAAFATEHYQAIESLVDALIK
YLNRLPGKVTVLVKGSRSSRMERVVEALVVAFGRGELV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgttaacgttaggcgatattgccaccgcagtagcgggacagttgccatctcag
actttagctgaggtgcagataaacagcgtcagcaccgatagccgtaacattacaaccgac
tgtctgttcatcgcgttgccgggggagcggtttgatggtcacgactatgcgccgaccgcc
gtcagtgctggtgctacggcgttattagtcagcaaattattacctttggatataccgcaa
gttctggtcgctgatacccataaagcgctggggcagttaggtgcgttagtgcgtaaccgg
gtcaatccgcgttgcgtggcgctgaccgggtctaatggcaaaaccagtgtcaaagagatg
gtggcgaccatcttgtcacagttggccccggtactttatacctcgggtaatttcaacaac
gatatcggcgtaccattaacggcactaaggctggaacctcagcatcagttcgctgtgttt
gaactgggcgccaaccacccaggtgaaattgactacacctcggctatcgtgcgtcccgag
gttgcactggtgaataatgtgggaagcgcgcatctggctgggtttggttccgaagctggt
gtggcggcggcaaaatcagaaatttttcgtcatctgcaaccgcaaggcattgccgtgatc
aatgccgatgaccattatgctcaggttatgcaggaggcggcggctggtcatcagcagtta
acgtttgcggtggacaccaacgcgcagctaactgccgcaaacttacaacatgatgcgaat
ggctgctaccgctttgaactgcactggcaagctcaggttcagccggtggtgttacccttg
gcggggcggcatcaggtacataacgccttggctgcggcaggcttgtgtctggggttaggg
ctgacgttaaccgacattgctaatgggctggcagcaatgcagccagtgaaggggcgtatg
cagcctaagccgttagggcgcttcatgctggtggacgatagttataacgccaaccccaac
tcggtcactgcggcgataaattggctgcaggaaattgacggaaatcgcattttggtactg
ggcgatttaggcgaattaggcgacaatgctgcgcctttacaccgagagctgggagagcgt
gcccgcaaagccgggatcgatgcgctattttgctgcggtgaactgactaaacacaccagt
gccgcttttgccacggagcattatcaggccattgagtcattggtggacgcattaataaaa
tatctcaaccggttgccagggaaagtcaccgtgttggttaaagggtctcgtagctcgcgc
atggagcgggtggttgaggcccttgtagtagcctttgggcgcggggagttagtgtaa
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