Shewanella dokdonensis: KHX94_07870
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Entry
KHX94_07870 CDS
T07469
Name
(GenBank) efflux RND transporter permease subunit
KO
K18902
multidrug efflux pump
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_07870
01504 Antimicrobial resistance genes [BR:
sdk01504
]
KHX94_07870
Transporters [BR:
sdk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KHX94_07870
Antimicrobial resistance genes [BR:
sdk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
KHX94_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QVK24389
LinkDB
All DBs
Position
complement(1643520..1646687)
Genome browser
AA seq
1055 aa
AA seq
DB search
MNISRFFIDRPIFAGVLSVMIFLAGLVSLPLLPISEYPEVVPPTVVVKASYPGANPKVIA
ETVAAPLEEQINGVEGMLYMNSQATTDGAMTLNVIFALGTDPDKAQQLVQNRVAQAEARL
PEQVQRLGVSTTKASPDLTMVVHLQSPNERYGMDYLRNYALLHLRDNLARIKGVGNVAIF
GGGEYAMRVWLDPDKLAQQHISASDVVAAINAQNIQVAAGTVGASPSLQGVQLQLSVNAK
GRLSTAEEFGEIIVQTSSTGAVTRLKDLARIELGAADYSLRSLLNNKPAVGIGINQAPGS
NALEISDQVRAVMAQAEKQMPEGVGYRIAYDPTQFVRASIKSVINTLLEAILLVVLVVVV
FLQTWRASIIPLLAVPISIVGTFAVLNLMGLSINALSLFGLVLAIGIVVDDAIVVVENVE
RNIEAGLSAREATYKAMREVSGPIVAIALVLVAVFVPLAFFSGLTGQFYRQFAVTIAIST
VISAFNSLTLSPALAAILLRGHDAPKDGLTRVMDRLFGRFFQLFNRLFHSGSERYQGGVN
RVLSHKGLMLLLFVGLGAVTGGLLKSVPTGYVPAQDKQYLVGFAQLPDGATLDRTEEVIR
RMGELAAKNPNVQDTLAFPGLSISGFTNSSSSGIVFVVLKPFDERRRADQSGAAVAAQLN
QAFGGIQDAFIAMFPPPPVLGLGTTGGFKLQLEDRTSLGFDAMDKAVNDFVAKAAQAPEL
QGVYSNWKLNVPQLFADVDRTKAQQLGVPLTDIFNTLSIYLGSVYVNDFNAFGRTYTVRV
QADAQYRAHAEDIGKLKVRNLNGDMVPLAAVMKVDNSYGPERVMRYNGFLTADINGTPAP
GYSSGQAQAAIERVAAATLPPGMAFEWTELTYQQILAGNSAVWLFPLTILLVFLVLAAQY
ESLTLPLAIVLIVPMSVLAAMVGIWLTNGDNNIFTQIGLMVLVGLSAKNAILIVEFAREL
ELSGKTPVQAAIEACKLRLRPILMTSIAFIMGVVPLVLSSGAGAEMRQAMGIAVFSGMIG
VTCFGLFLTPVFYVVLRKLTGNKPLHFHGEKPPLA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctcccgcttttttatcgaccgcccgatttttgcgggtgtgctgtcggtaatg
atttttctggctggcttagtatcgctaccgctactgccgatctctgagtatcccgaagtg
gtaccgccgacagtggtggtgaaagccagctaccctggggcaaacccgaaagtgattgcc
gaaaccgtggcggcgccgctggaagagcagatcaacggcgtcgaaggcatgttgtacatg
aacagccaagccaccaccgacggggcgatgacgctgaacgtgatttttgccttgggcacc
gatcccgataaagcgcagcaactggtacaaaaccgcgtggcgcaagccgaagctcgcttg
ccggaacaagtgcagcgcctaggtgtgtctaccaccaaagcctcgccggatctaaccatg
gtggtgcacctgcaatcaccgaatgaacgttatggcatggattacctacgtaactacgcg
ttgttgcatctgcgtgataacttggcgcgcatcaaaggcgtgggcaatgtggcgattttt
ggtggcggcgagtacgccatgcgggtgtggctcgacccagacaaactggcgcagcaacat
atctccgccagcgatgtggtggccgcgattaacgcgcaaaatattcaagtggcggccggt
actgtgggtgccagcccaagcttgcaaggcgtacagttacagctgtcggtcaacgccaag
gggcgtttatcgactgctgaagagtttggcgaaatcattgtgcaaacctctagcacgggg
gcggtcacgcgtttgaaagacttagcgcgtatcgaactgggggcggcggattattcgctg
cggtcactgctgaataacaagccagcggtggggattgggattaaccaagcgccgggttcc
aacgcgttggagatctctgatcaagtgcgcgcggtgatggcgcaagccgaaaaacagatg
ccagaaggtgtcggttatcgcatcgcgtatgatcccacccagtttgtgcgagcgtcgatt
aagtcggtgatcaacactttgctggaagcgattctgctggtggtgttagtggtggtggtg
ttcctgcaaacatggcgcgcgtcgatcattcccttgctggcggtgccgatttcgattgtc
ggtacttttgcagtactcaacctgatgggcttgtcgatcaacgcgctgagcttgttcggc
ctggtgttagccatcggtattgtggtggatgatgccatcgtggtggtggagaacgtcgag
cgcaatatcgaagcggggttgtcagcacgcgaagcaacttacaaagcgatgcgcgaagtg
tcgggcccgattgtggcgattgccttggtgctggtggcagtgtttgtgccgttggcattt
ttcagtggtttgacggggcagttctatcgtcagtttgcggtgacgattgccatttcaacg
gtgatctcggcgtttaactcgttgaccttatcaccggcactagcggcgattttactgcgc
gggcacgatgcgcccaaagacggcttaacccgggtgatggacagactgttcggtcgcttc
ttccagctgtttaaccgcctattccacagtggtagcgagcgttatcaaggtggcgttaac
cgcgtgttgtcgcacaaaggcttgatgttgctgttgtttgttgggttaggtgccgtcact
ggcggcttattgaaaagcgtgccgaccggttatgtgcccgcgcaagacaagcaatatctg
gtgggctttgcccagttgcccgatggcgccactctagaccgtaccgaagaggtgatccgc
cgtatgggtgaactcgctgccaagaaccccaatgtgcaagacaccttggcgttccccggc
ttgtcgatcagtggcttcactaatagttcgagttccggcattgtgtttgtggtgctcaaa
ccgtttgatgaacgtcggcgagccgatcaatccggtgcggcggtggcggcgcagctgaac
caggcctttggtggcattcaggatgcgtttattgctatgttcccgccaccgcctgtgctg
ggcttaggcaccactggcggctttaaattgcagctggaagatcgcacctcgcttggcttt
gatgccatggataaagcggtcaatgactttgttgccaaagcggcgcaagcgccagaattg
caaggtgtatacagcaactggaagctcaacgtaccgcaactgtttgctgatgtagaccga
actaaagcgcagcaattgggggtgccgctgaccgatatttttaacaccttgtcgatctat
cttggctcggtttatgtcaacgatttcaatgcttttggtcgaacttataccgtgcgagtg
caagccgatgcgcagtatcgtgcccatgcggaagatattggcaaactgaaagtgcgtaat
ctcaacggcgacatggtgccattggcggccgtcatgaaggtggataacagctacggccca
gagcgagtgatgcgttacaacggctttttgaccgccgatatcaatggcacgccggcgccg
ggctattcctccggccaagcgcaagccgcgattgaacgtgtcgccgccgccaccctgccg
ccgggcatggcgttcgaatggactgagttgacctatcagcagattttggcgggtaactcg
gcggtatggttgttcccattgaccattctgttggtgttcctggtgctggccgcgcagtac
gaaagtttgaccttgccgttggcgattgtgttgattgtgccgatgagcgtgctggcggcg
atggtgggcatctggctcactaacggtgacaacaacatctttacccaaatcggtttgatg
gtgctggtggggctgtcggccaaaaacgctatcttgattgtcgagtttgcccgcgagttg
gagttgagcggtaagacgccagtccaagccgccattgaagcctgtaagctacgtttgcga
ccaattttgatgacctcgattgccttcatcatgggcgtagtgccgctggtgttgtcatcg
ggtgccggtgccgagatgcgccaagccatgggcattgcagtatttagcggcatgattggt
gtgacctgcttcggcttgttcctcacgccagtgttctacgtggtgttgcgtaagctgacc
ggtaataaaccgctgcattttcacggtgaaaaaccgccactcgcttaa
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