Shewanella dokdonensis: KHX94_07875
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Entry
KHX94_07875 CDS
T07469
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_07875
01504 Antimicrobial resistance genes [BR:
sdk01504
]
KHX94_07875
Transporters [BR:
sdk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KHX94_07875
Antimicrobial resistance genes [BR:
sdk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
KHX94_07875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
PTS_EIIA_1
Sos7
Thioredoxin_4
Motif
Other DBs
NCBI-ProteinID:
QVK24390
LinkDB
All DBs
Position
complement(1646691..1647884)
Genome browser
AA seq
397 aa
AA seq
DB search
MNATTIVKRHRLLALTTAGLLGYGITATLPSEPALAETQALPAAVPVTAVQVHQQRFMPW
HEYSGSVEAIDQVNVRARVAGMLQSVHFEEGSYVKKGQLLLTIDPAPFQAEQQKAEATVA
AAAAQSAQAQLEYQRAKRLWERKLIAENDMEQLQNTANAAKANLQAAKADLALAQLNLSY
TQVTAPVAGRIGKLAFTPGNLIAAGNSAAPITSIVSMSPIYVNFDVESAIATGVLAQLGN
GREQLARLDQVPVKAQSSGGTITEQGTLKLVNNMVDAGSGTLNMRAVFDNSDGQLLPGQF
VRVSLGQAQPSEGVLLTESAIGTDQDKKYVLVVDQQNQVEYRSVTLGSIVAGKRVISAGL
HDGERVIVSGLQRVRPGSSVTVTIADDNTAAMANKGA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgacaactattgtcaaacgccatcgtttattggcgctaacaaccgcagggttg
ctgggctacggcatcacagccacgctgccaagtgagcccgcgctggcagaaacccaagca
ctgcctgcggcggtgccagtcacggccgtgcaagtgcatcaacaacgctttatgccgtgg
catgaatactctggcagtgttgaagcgattgaccaagtcaacgtgcgcgctcgtgtcgct
ggcatgttgcaaagtgtgcattttgaagagggcagctatgtgaaaaaaggccagctgttg
ctgaccatcgacccggcaccattccaagcagaacagcaaaaagccgaagcgacggtggcg
gcggccgcggcgcaaagtgcgcaagcgcagttggaataccagcgggctaaacgcttgtgg
gaaagaaaactgattgctgaaaacgatatggagcaactgcaaaataccgccaatgctgcc
aaggccaatctacaagcggccaaagcggatttagcgttggcgcagttgaacctgtcatac
acccaagtgaccgcgccggtggcggggcgcatcggcaaactagcgtttacgcccggtaac
ttgattgccgcaggcaacagcgctgcgcccatcaccagcattgtttctatgtcgcctatt
tacgtcaattttgatgtggaaagtgctatcgccactggcgtgttagcgcaactcggcaac
ggccgcgagcagttagcgcggcttgatcaagtgccagtaaaagcacaaagcagtggtggc
accatcaccgagcagggcacgctgaaactggtcaacaacatggtggatgcgggcagtggc
acgctcaatatgcgcgcggtgttcgacaacagcgatggtcagttgctgccggggcagttt
gtgcgggtcagcctcggccaagcacagccaagcgagggtgtactgctgacggaaagtgcc
atcggcaccgaccaagataaaaaatatgtgctggtggtggatcagcaaaaccaagtggaa
tatcgcagtgtcacgctcggcagtattgtggcgggcaaacgggtgatcagcgctggcctc
catgatggtgagcgcgtgattgttagcggcctgcaacgggtgcgtcccggcagcagcgtc
actgtgaccattgcggatgataacaccgctgcaatggcaaataagggtgcgtaa
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