Shewanella dokdonensis: KHX94_07900
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Entry
KHX94_07900 CDS
T07469
Symbol
selD
Name
(GenBank) selenide, water dikinase SelD
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00450
Selenocompound metabolism
sdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
KHX94_07900 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdk03016
]
KHX94_07900 (selD)
Enzymes [BR:
sdk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
KHX94_07900 (selD)
Transfer RNA biogenesis [BR:
sdk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
KHX94_07900 (selD)
Prokaryotic type
KHX94_07900 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
DUF6885
Motif
Other DBs
NCBI-ProteinID:
QVK24394
LinkDB
All DBs
Position
1651763..1652806
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AA seq
347 aa
AA seq
DB search
MSDDPIKLTEYSHGAGCGCKISPKVLTTILASQLPGFTDPNLLVGNQTRDDAAVYKLDDH
TGIISTTDFFMPIVDDPFTFGRIAATNAISDVYAMGGTPLMAIAILGWPVSKLPAEVAQQ
VVDGGRQACADAGIMLAGGHSIDAPEPIFGLAVTGKVDLAHLKQNDTAKSGDLLYLTKPL
GIGILTTAQKQKKLADEDSHIAPDAMCQLNKIGAEVARLAGVNAMTDVTGFGLAGHLLEV
CQGAKLSATVNVAALPLLPKAREYLVKGCIPGGTHRNFDSYGEHLPPLDEQQKALLCDPQ
TSGGLLITVAPAQEAALLDVLATHGVSGYKIGALAEHQPHTEWIQLQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatccgattaaactgaccgaatacagtcacggagctggctgtggctgcaaa
atttcgcctaaagtgctgacaaccatccttgcttcacaactgccaggctttaccgacccc
aacctgctagtaggtaaccagactcgtgatgatgctgcggtatataagctggatgaccat
accggcatcatcagtaccactgactttttcatgccgattgtagacgacccgtttaccttt
ggccgcattgccgcaaccaatgccatcagtgatgtctatgccatgggcggtacgccactg
atggctattgctattctgggctggccggtgagcaaactgccagcagaagttgcccaacaa
gtggtagatggtggtcgccaagcctgtgccgatgccgggatcatgttggccggaggtcac
agtattgatgcgccggaacctattttcggcctggccgtcacaggtaaagtcgatttggcg
catctgaagcagaatgacactgccaagtcgggcgacctgttgtatctgaccaaaccgcta
gggattggcatcttaaccaccgcccagaagcagaaaaaactggccgatgaagatagtcac
atcgccccagacgccatgtgccaactcaacaagattggcgcggaagtggcgcgtttagcg
ggtgtcaatgccatgactgatgttaccggctttggactggccgggcatttactggaagtc
tgccaaggggccaagctatccgccaccgtcaatgtggccgcgttgccgctgctgcctaaa
gcccgcgaatatttggtaaagggctgtattcctggcggaacccatcgcaactttgacagc
tacggggagcatctgccgcccttggatgagcaacaaaaagcactgctgtgcgatccacaa
accagtggaggcttgctgatcacagtagcaccagctcaggaagcggcactgctggatgtg
ttggccacccacggtgtcagcggttataagattggggcgctggcagaacatcagcctcat
accgaatggatccaactgcaataa
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