KEGG   Shewanella dokdonensis: KHX94_07970
Entry
KHX94_07970       CDS       T07469                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
sdk  Shewanella dokdonensis
Pathway
sdk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sdk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KHX94_07970 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sdk02044]
    KHX94_07970 (gspD)
Secretion system [BR:sdk02044]
 Type II secretion system
  General secretion pathway protein
   KHX94_07970 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: QVK24406
LinkDB
Position
complement(1664224..1666362)
AA seq 712 aa
MNNKRIRTKLIAGLVATAALLTQPSAWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPT
VRGKINVRSYDMLNDQQYYQFFLNVLQVYGYAVVEMENNVIKVVKDKDAKVSSIRLADDK
TPGLGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVVNYDPSNVLMITGRAAVVNKL
VDIVKQVDKQGDVDTQVVQLKFASAGEIVRIIDNLYRTSANQAQMPGQAPKVVADERTNA
VVVSGDQRSRERAVELISRLDAEQATTGNTKVRYLKYAKAKDLVEVLDGFAKKLENKDGT
ATAAAVAGGTGKRNNNITIMAHEETNSLVISAEPDQMRTLENVINQLDIRRAQVLVEAII
VEISEGDNIGLGVQMGSLSGGLTQFNNIGPSLAEVGAGVWSARTKDGNTITTYDSNNQPI
VTKNPDTDGDVTALASALSKVNGVAWGIVSGDFGALIQAVASDTNSNVLATPSITTLDNQ
EASFIVGDEVPVITGSQSSQNGNSNPFTTVERKEVGVKLKVVPQINEGNAVKLAIEQEVS
GVNGNTSVDVTFATRKLSTTVMADSGQIVVLGGLINEETQESVQKVPLLGDIPFLGQLFR
SSSSKKTKRNLMVFIKPTIVRDGVTMEGIAGRKYNYFRALQLEQQQRGINLMPDAKVPVM
DELKSDEQLPPDVNEILQRYKNGQGLAMPKRESEPALKAINGDNKQDGSDHE
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgaataataaacggattcgaaccaagctgatcgcggggttggtggctaccgctgccttg
ttgacccaaccgagcgcctggtcggaacaatatgcggccaacttcaaaggcactgatatt
caggaatttatcaatatcgtaggtaaaaacctgaataagaccatcattgttgatcccacg
gtgcgcggcaagattaacgtgcgcagctacgacatgctcaacgatcagcaatattaccaa
ttcttccttaacgtgctgcaagtttatggctatgccgtagtggagatggaaaacaacgtc
atcaaggtggtgaaggataaagacgccaaagtctcctctattcgcctcgccgatgacaaa
acaccgggattgggtgatgaaatggtcacccgcattgttgccctgtataacaccgaagcc
aaacagctggcgcctttattacggcagttgaacgataacgctggcggcggcaacgtggtt
aactatgatccatcaaacgtgctgatgatcaccggccgcgccgcagtagtgaacaagctg
gtggatatagtcaagcaggtggacaaacaaggggatgttgacacccaggtggtgcagctg
aaatttgcctctgccggtgagattgtgcggattattgacaacctgtaccgtaccagcgcc
aatcaggcacagatgccagggcaggctcctaaagtggtggctgatgagcgcactaacgct
gtggtggtcagtggcgatcaacgtagccgtgaacgggcggtggaacttatctctcgtttg
gatgctgagcaagccacgacgggcaacaccaaagtccgttatctgaaatatgctaaagcg
aaagatttggtggaagtcttagatggctttgccaagaagctagaaaataaagatggtaca
gcaaccgccgctgcggtggcgggtggcacgggtaagcgtaataacaacatcaccatcatg
gcgcatgaagagactaactcgttagtgatcagcgccgaacccgatcagatgcgcacgctg
gaaaatgttatcaatcaattggatatccgccgggcgcaggtgctggttgaagccatcatc
gtcgaaatttccgaaggcgataacattggcctcggggtgcagatggggtcgctgtctggc
ggcttgacccagttcaataatattgggccatctctggccgaagttggtgccggggtctgg
agcgcgcggactaaagacggcaatacaatcaccacatatgacagcaataatcagccgata
gtgaccaaaaatccagacaccgacggtgacgtaaccgcactggccagcgccctgagtaaa
gtcaacggtgtggcgtgggggattgtttccggcgattttggtgctttgatccaagccgtg
gcatccgataccaattcaaatgtactggcaacaccatccatcaccaccttggataaccaa
gaagcgtctttcattgtcggtgatgaagtgcccgttattaccggttcacagagttcgcaa
aacggcaatagcaacccttttactacggttgaacgtaaggaagtcggcgttaagttgaaa
gtggttccacagatcaacgaaggtaacgcggtcaagctcgccattgagcaggaagtttct
ggtgttaatggtaacaccagcgttgacgtcacgtttgccactcgtaagttatccaccact
gtgatggccgactctgggcagattgtggtgctcggcgggctgatcaacgaagaaacccag
gaaagtgtgcagaaagtaccattgctgggtgatatcccgttcctcgggcagttgttccgc
tccagcagcagtaaaaagaccaagcgtaacctgatggtatttatcaaaccgaccatcgtc
cgtgatggcgtgaccatggaaggcattgcgggtcgtaagtacaactatttccgggcgcta
cagctagaacagcaacagcgcggtatcaacctgatgccagatgctaaagtgccggtgatg
gacgagctgaaaagcgatgagcaattaccgccagacgtgaatgaaatcctgcagcgttac
aaaaacggtcaggggctggcaatgcctaaacgcgagtcagaaccggcgttaaaagcgatt
aacggcgacaataaacaagacggcagtgaccatgagtga

DBGET integrated database retrieval system