KEGG   Shewanella dokdonensis: KHX94_08585
Entry
KHX94_08585       CDS       T07469                                 
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
sdk  Shewanella dokdonensis
Pathway
sdk00071  Fatty acid degradation
sdk00280  Valine, leucine and isoleucine degradation
sdk00310  Lysine degradation
sdk00362  Benzoate degradation
sdk00380  Tryptophan metabolism
sdk00410  beta-Alanine metabolism
sdk00640  Propanoate metabolism
sdk00650  Butanoate metabolism
sdk00907  Pinene, camphor and geraniol degradation
sdk00930  Caprolactam degradation
sdk01100  Metabolic pathways
sdk01110  Biosynthesis of secondary metabolites
sdk01120  Microbial metabolism in diverse environments
sdk01200  Carbon metabolism
sdk01212  Fatty acid metabolism
Module
sdk_M00087  beta-Oxidation
Brite
KEGG Orthology (KO) [BR:sdk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    KHX94_08585 (fadB)
   00650 Butanoate metabolism
    KHX94_08585 (fadB)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    KHX94_08585 (fadB)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    KHX94_08585 (fadB)
   00310 Lysine degradation
    KHX94_08585 (fadB)
   00380 Tryptophan metabolism
    KHX94_08585 (fadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    KHX94_08585 (fadB)
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    KHX94_08585 (fadB)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    KHX94_08585 (fadB)
   00930 Caprolactam degradation
    KHX94_08585 (fadB)
Enzymes [BR:sdk01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     KHX94_08585 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     KHX94_08585 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     KHX94_08585 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     KHX94_08585 (fadB)
SSDB
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2
Other DBs
NCBI-ProteinID: QVK24496
LinkDB
Position
1781659..1783809
AA seq 716 aa
MIYKSNTIHVELLDSKIANLCFNSTGSVNKFDRETLTSLNEALDVIKATADIRGLVLTSA
KDNFIVGADITEFLALFAQEDEVLLSWLQLANSIFNKLEELPYPTAAAVNGYALGGGCEV
ILSTDFRIGDSSAKVGLPETKLGIIPGFGGTVRLPRLIGADNALEWITTGKEQRPEDALK
VGFFDAVTSPEHLQSVLLQMLEDAIAGKLDWQSKRKQKQQPLKLDKMEALMAFSTAKGMV
FAVAGKHYPAPMAAVGVIEQAANMARQQALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK
SKAKKIIKAAHHIDQAAVLGAGIMGGGIAYQSASKGTPIVMKDINHKALELGLSEAAKLL
TAQLERGRSSPQKMAQVLNAITPALDYSAVKPANIVVEAVVENPKVKSTVLAEVEQVVAD
DAVIASNTSTISIDLLATSLKKPERFCGMHFFNPVHKMPLVEVIRGKNTADSTIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNALIADGADFAAVDKVMEKQFGWPMGPAYL
LDVVGMDTGHHAQAVMAQGFPERMATSAKDALQLMFAQNRLGQKNGAGFYRYSPDKKGKP
KKERDNAAYELLAAAFGPVKEFSADEIIARTMIPMINETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYVETMGLANYVAWADKYAHLGPLYQVTDAMRQLAAENGHYYQN
NT seq 2151 nt   +upstreamnt  +downstreamnt
atgatctataaaagtaatacaattcacgttgaactgcttgacagtaaaattgcaaatcta
tgttttaattcaacaggttctgttaataaatttgatcgagaaacgctgacatcactcaat
gaagcgctggatgttatcaaagcaactgccgacattcgtggccttgttctcacctcagct
aaagacaactttattgttggtgccgacattaccgagtttctggcattgttcgcgcaagaa
gatgaagtgcttttatcatggttgcagttagcgaacagcatttttaacaagctggaagag
ttgccttatccaacagcagctgcggttaacggctacgccttgggcggtggctgtgaagtt
atcttatcgacagatttccgcatcggcgatagctctgcaaaagtaggtttgccagaaact
aaactggggatcatcccaggttttggtggcacggtacggttaccgcggcttatcggcgcc
gataatgcgcttgagtggatcactacgggtaaagagcagcgcccagaggatgctctcaaa
gtaggattttttgatgccgttacttcccctgaacacctgcaaagtgtgttattgcaaatg
ttagaagatgccattgccggcaaactcgattggcaaagcaagcgcaaacagaaacaacaa
ccattgaaattggacaaaatggaagcattaatggccttttccaccgctaaggggatggtg
tttgcagttgcaggtaaacattatcccgccccaatggcggctgttggcgttattgagcag
gcagccaatatggcgcgtcaacaggcattgcaggtagaacatcaggcgttcataaaactc
gctaaaacagatgtggcgaaagcccttattggtattttcctcaacgaccaactcgtcaaa
agtaaagccaagaaaatcattaaggctgcccatcatattgaccaagccgccgttctaggg
gcaggaattatgggtggtggtatcgcttatcaaagtgccagcaaaggcacgcctatcgtg
atgaaagacattaaccataaagcgttggagttaggcctctcagaggcggccaaattactg
acagcacagttggaacgtggtcgttcatcgccgcagaaaatggcacaggtattaaatgcg
attacaccagcattggattattccgcagtcaagccagccaatattgttgttgaagcggtt
gtagaaaatcccaaagtgaagagtaccgtcttagcagaggttgaacaggtcgtggctgat
gatgccgttatcgcatccaatacttccacgatatctatcgacttgctggctaccagtctt
aagaaacctgagcggttctgcggtatgcatttcttcaatccggtgcataaaatgccgttg
gtagaggttattcgtggcaaaaacaccgccgacagcaccattgcaaccgtggtggcttat
gccagtaagatgggcaaaacaccgattgtagtgaacgactgccctggtttttttgtgaat
cgagtgctgttcccctattttgccggtttcaatgctttgattgctgatggtgctgatttt
gcggcggtcgataaagtcatggaaaaacagttcggttggccaatgggcccagcctatttg
cttgatgttgttggtatggatacggggcatcatgcacaagcagtgatggcgcaaggcttt
ccagaacggatggcgactagcgctaaagatgccctacaactgatgtttgcacaaaatcgc
ttagggcaaaaaaatggcgcaggtttctaccgctatagcccagataaaaaaggcaagccc
aaaaaggaacgggataatgcagcctatgaattgttagctgcggcttttggcccagtaaag
gaattcagtgctgatgaaattattgctagaaccatgatccccatgattaacgaaaccgtg
cgctgtttggaagaaggtatcattgcctctccggctgaagccgatatggggttggtgtat
ggcttgggctttcctccatttaggggtggcgtattccgctatgtagaaactatggggctc
gccaattatgtcgcttgggctgataaatatgcccatcttgggccgctgtatcaggtaact
gatgccatgcgacaacttgccgcagaaaacggccactattatcagaattga

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