Shewanella dokdonensis: KHX94_08950
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Entry
KHX94_08950 CDS
T07469
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
KHX94_08950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
HHH_6
RuvX
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QVK24546
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Position
1858389..1860737
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AA seq
782 aa
AA seq
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MHNIAQLIAQELDVREQQVAATITLLDEGATVPFIARYRKEVTGGLDDTQLRTLYSRLGY
LRELNERREVILKSIDEQGKLTPELAKALNDADTKTRLEDLYLPFKPKRRTKGQIAIEAG
IAPLAEQLLAAVGDASVEPEREATRFLNSEAGFADEKAVLDGARYILMERFAEDADLLAK
VRRHLAEHALLESKVVSGKEQEGAKFRDYFEHSEPISQVPSHRALAMLRGRNEGMLALAL
NADPGSEAKDGSYCEQIITEHLGWRLSDIAIDRWLRTVVTATWRIKIALQMETEFIAQMR
EAAESEAIKVFARNLGDLLMAAPAGAKATMGLDPGLRTGVKVAVVNDTGKLVAHTTIFPH
APQNQWDKSVRTLATLVNMHQVELIAIGNGTASRETDKLAAEVINAVKEQQPRLTKVVVS
EAGASVYSASELAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQ
SQLSTSLDAVVEDCVNSVGVDVNMASVPLLSQVAGLNRTLAKNIVDYRDENGRFTDRKTL
LKVPRLGPKAFEQAAGFLRIHGGDNPLDESAVHPEAYMLVENISRAKSTPLAQMIGNSAL
LASLNPVDFTTAEFGLPTVTDILKELDKPGRDPRGEFKTAHFKDGVEAITDLRPEMLLEG
VVTNVTNFGAFIDIGVHQDGLVHISSLTDKFVSDPHTVVKAGDVVKVKVLEVDVPRKRIS
LTMRLDEKPEAKSAVSKPTAKPAAKKDTKHSKPQPHKKQETAKPMNAAMGNAFAEAFAKL
KK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatattgctcaactcatagctcaggaactggatgttcgcgagcagcaggtagcg
gcgactattacgttgctagatgaaggtgccacagttccatttattgcccgttatcgtaaa
gaagtgactggtggtttggatgatacccagttgcgtacactgtatagccgcttgggttat
ctacgggaactgaatgagcgccgcgaggtaatcctcaagtcgattgacgagcaaggcaag
ctgacccctgaattagccaaagcgctcaatgatgctgacaccaaaacccgcctagaagat
ctgtatctgccattcaaacccaaacgtcgtactaagggccagattgccatcgaagcagga
attgcaccattggctgagcagttgctggccgctgttggcgatgccagtgtcgagcctgag
cgtgaagcaacccgttttcttaactcggaagctggctttgccgatgaaaaagcggtgttg
gatggtgcccgttatatcctgatggaacgttttgctgaagatgcagatttgttagccaaa
gtgcgtcgtcatttagcggaacatgcactacttgaaagcaaagttgtgagcggtaaggag
caggaaggtgccaaattccgcgactactttgagcactcagaacccatcagtcaggtgcca
tcgcaccgggcgttagccatgctgcgtggccgcaatgaaggcatgctggcacttgcgttg
aatgccgatcctgggagcgaagccaaagatggcagctattgtgaacagatcatcactgag
catctgggctggcgcttgtctgacatagcgattgaccgctggttaagaaccgttgtgacc
gcaacttggcgcattaaaatcgcattgcagatggaaaccgagttcatcgcgcagatgcgt
gaagctgctgagtcggaagcgatcaaagtctttgcacgcaatcttggcgatctgttgatg
gccgctcctgccggtgctaaagccaccatggggcttgatccaggattacgtactggcgtg
aaagtggcggtggtaaacgataccggtaagctggtggcgcacactactattttccctcat
gcaccacaaaatcaatgggacaaatcggtcaggacgctcgcgactctggttaatatgcat
caggttgaactgatcgccatcggtaacggaacagcctccagagaaaccgacaaactagcg
gccgaggtcattaacgcagttaaagaacagcaaccaagacttaccaaagtggtggtgagc
gaagctggggcctcggtctattcagcttctgaactggctgccaacgaatttcccgatctg
gatgtgtcgttgcgtggcgccgtctctattgcccgccgcttgcaggatcctttggccgag
ctggtgaagatagaacccaagtcgattggcgtgggccagtatcagcatgatgtcagtcaa
agccagttgtctacctccctggatgccgtggtggaagactgtgttaacagcgtgggcgta
gatgtcaacatggcatcggtaccactgttaagtcaggtggcaggactcaaccgcacactg
gcgaaaaatattgtcgattaccgtgatgaaaatggccgttttacggatcgtaaaacttta
ttgaaggtaccgcgccttgggccaaaagcctttgaacaggcggcggggttcctgcgcatt
catggcggtgataacccattggatgaatccgcggtgcatccagaagcctatatgctggtg
gagaatatctctcgcgctaaaagtacaccactggcgcagatgataggtaactctgcgtta
ttggcaagcttgaatcctgtggatttcactaccgctgagtttggtttgcccacggtgacc
gatattctgaaagagctggataaaccggggcgtgatccacgcggtgagttcaagacggcg
cattttaaagatggggtggaagcgataaccgacctacggccagaaatgctgctcgaaggt
gtggttaccaatgtgactaattttggtgcttttatcgatattggggtgcatcaggacggc
ttggtacatatctcatcgctcaccgacaagtttgtcagcgatccccataccgtggtgaaa
gctggcgatgtggtcaaagtcaaagtgctggaagtggatgtcccgcgcaagcgcatcagt
cttaccatgcggcttgatgagaagccggaagctaaatctgccgtatcgaaaccaacggct
aagccagcggcaaagaaagacactaagcacagtaagccgcaaccacataagaagcaggaa
acagcaaaacctatgaatgcggctatgggaaatgcatttgctgaagcttttgccaagctg
aagaaatag
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