Shewanella dokdonensis: KHX94_09025
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Entry
KHX94_09025 CDS
T07469
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_09025
Transporters [BR:
sdk02000
]
Other transporters
Pores ion channels [TC:
1
]
KHX94_09025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QVK24556
UniProt:
A0ABX8DIR3
LinkDB
All DBs
Position
1874984..1877197
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AA seq
737 aa
AA seq
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MCKYAFAAKVLVFACMFTGLGYAAEATPTVAAKSIERLKVIGTNPHRYQTSSGDSLFGQE
LDYLEMPRVIDVLPEQLLLDQKVTELEDALRNVPGVSLSDGFGGSNNDYLIRGFRRNTIY
RDGLRIASNFRVNTSNLESIRVIKGPASITYGQVEPGGLVDVITKKPLNERRLYTEARAG
SWDNYMFQGDFSTPLGDSAAVRANVSLQDSGYFRNDFDIKRNVIALTGRYDLSNSTRLSA
SYEYRDEFRSFDRGTMTVPTANGREIVNRLLDIPRSRRFGDEAEEIDTRFEFSTVGVNHL
FANGWQLDMRAAWENSYSNDLQSRPVAEVITDASAPIVNGYITAPDFNDHVKAVYAAGDR
IFLARRTDGNREQKERVDYQQLRVTGDWQLAGMVHRLAFGADRRNYHSARYFIATPITMG
TPATGALFDIANPVYGMLPTALSTEGAERLHDATEDYGFFANDYLELTEQLSVLVGGRWD
FSDVDGNGPADTVNEFSPQVALNYRMLDNLSTFISYSEAFSPNTTFKLEANGQSSDTELF
PPENSKQYEVGAKGQFFEGKLNSSLALYKIEKNNVLTQVDNEYQLVKGQQSQGVELNING
QPLPGWTVMAGYAYTDAEISTDNNAGNRPRNVAKHTASLWTSYEFHDGTWQGVGAGVGAF
YMGDRFGDDRNSWRLGSYTTVDLSLWYTLPTAYDGNIRLQLSAKNLFDEEYYSASGGDLR
VSVGSPRSLFASVSATF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaatatgcttttgcagcaaaagtgttagtgtttgcttgtatgttcaccggttta
ggttatgccgctgaagccacgccaacggttgcagctaaatcgattgaacgtctaaaggtg
ataggaactaacccccatcgttatcagacctccagcggtgatagtttatttggtcaagag
ctggattatttagagatgcctcgggtcatcgatgtcttaccagaacaactgctactcgac
caaaaggtcacagaacttgaagatgcactacgcaacgtaccgggcgtcagtctgtcagat
ggctttggcggcagtaataatgactatcttattcgcggttttcgccgtaacaccatctac
cgtgatggcctacgcatcgcttcaaattttcgagttaataccagcaacctagaaagtatt
cgcgtgatcaaaggcccggcttccattacttatggtcaagtcgaacccggtggcttagtt
gatgtcattaccaaaaaaccgcttaatgaacgacgactctatactgaagcgcgcgcaggt
tcttgggataactatatgttccaaggtgacttctctactccgcttggtgatagcgccgct
gtgcgcgctaatgtgtcgttgcaagactcagggtattttcgcaatgactttgatatcaaa
cgcaatgtgattgctttaactggccgttatgatctttccaatagcacccgtttgagtgca
tcgtatgaatatcgcgacgagttccgttcctttgaccgtggcaccatgacagtgccgacg
gctaatgggcgcgaaattgtcaaccgtttgctggatattccccgttcacgccgctttggt
gatgaagcggaagagatagacacgcgttttgaatttagcactgtgggcgttaaccacctg
tttgccaacggttggcaactggatatgcgtgccgcgtgggaaaactcttattccaacgat
ctgcaatcacgccctgtggcggaagtgatcaccgatgcatccgcaccaatcgtcaacggt
tacattacagcccctgactttaacgaccatgttaaagctgtttacgcagcgggtgaccgc
atctttttagctcgtcggacggatggtaaccgtgagcaaaaagagcgagtggattaccag
caactgcgagttacaggggactggcagttagccggcatggttcaccgcttggcctttggt
gctgatcgtcgtaattaccatagcgcccgctactttatcgctacccctattaccatgggc
acgccagcgacaggtgcgctgtttgatatcgctaatccggtgtatggcatgttaccgacc
gcgttatcaacggaaggggctgaacgcctgcatgatgccacggaagattacggctttttt
gctaatgattatcttgaactgactgagcaactgagcgtgctggttggtggccgctgggac
ttttctgatgtagacggtaatggcccagcagacacagttaacgagttttcgccgcaggtg
gcattgaattatcggatgctggacaacctgtcgacttttatcagctactccgaagctttc
tcacccaatactacgtttaagttggaggctaatggccaaagctctgacactgagctattt
ccgccagaaaactccaagcagtatgaagtgggtgccaaaggccaattctttgaaggcaaa
ctcaacagcagtttggcgttgtacaagattgagaaaaacaacgtacttacacaagtggat
aatgaatatcagctggttaaaggccaacagtcacaaggggtggagctcaacatcaacggc
caaccgttacctgggtggacagtaatggcgggttacgcctacacagatgcggagatcagc
accgacaataacgccggtaatcgcccgcgtaatgtcgccaaacacacggcgagcttgtgg
acgagttatgagtttcatgacggaacatggcaaggtgttggtgccggagtcggtgccttt
tatatgggcgaccgcttcggtgatgaccgcaatagttggcgtttagggagctacaccaca
gtggatctatcgctatggtacaccctgccaacggcttatgacggcaatattcgtctgcag
ctttcggcgaagaatctgtttgatgaagagtactacagcgccagcggtggtgacttacgc
gtcagtgtcggttcgccacgtagcctgtttgcttcggtttcggccaccttctaa
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