Shewanella dokdonensis: KHX94_09040
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Entry
KHX94_09040 CDS
T07469
Name
(GenBank) ribonuclease T
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdk03016
]
KHX94_09040
Enzymes [BR:
sdk01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
KHX94_09040
Transfer RNA biogenesis [BR:
sdk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KHX94_09040
Prokaryotic type
KHX94_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
S_4TM
Motif
Other DBs
NCBI-ProteinID:
QVK24559
UniProt:
A0ABX8DIE2
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All DBs
Position
complement(1879579..1880595)
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AA seq
338 aa
AA seq
DB search
MPSTEYRFNLSGTVKTILGITLLFAISYSSLAAPVDDGTFVADRSCPLYQSKNKHTNPDN
LHSTPGQAFVIKEVLGTPNPHWFRVTTTAPQAPLRWIAAECGHLTAPVQATVTTANSCNL
QQSFDSQVLALSWQSAFCELRGSAKPECKALNRKSYAAGHFTLHGLWPNKSSCGGNYGYC
GDVKQQPRNFCDYPALQLTEQTASALKQLMPSYAFGSCLERHEWWKHGSCRDAQPDNYYQ
LATRLAGQVNEASPLLGFINAHLGGTVKKQDFLHAWKQAFGEGSEHKLTLKCDKEMLTEI
RISLPATIADDATLTQLLQQAATVRPGNCGRKFRIDRP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcactgagtatcgttttaatctgagtggcacagttaaaacaatattaggaatt
accctgctatttgctatcagctatagcagtctggcggcccctgtcgatgatgggaccttt
gtggccgaccgctcctgtccgttataccaatccaaaaataaacacaccaacccagataac
ctgcatagtactcctgggcaggcgtttgtaattaaagaggttttgggcacacccaacccc
cactggttcagggtcaccaccactgcgccgcaagcaccgctacgctggattgcggcagag
tgtggtcatctcacagcccccgtacaggcaacggttactaccgccaacagctgtaacctg
caacagagtttcgatagtcaggtgctagcactctcatggcaaagcgccttttgtgaactg
cgtggcagtgccaaacccgagtgcaaggcgcttaatcgtaaaagttatgccgcaggacat
tttaccctgcacggtctatggcccaacaaaagcagctgtggtggcaattacggctattgt
ggcgatgtgaaacagcagccgcgtaacttctgtgattatccggcgttacagttgactgaa
caaaccgcctcagccctgaaacaactgatgccaagctatgcctttggcagttgcttagag
cgtcatgaatggtggaaacatggcagttgtcgtgatgcccaaccagacaactactatcaa
ttagccacccgtctggccggacaggttaacgaggcatcgccgctattgggatttatcaat
gcccatctcggcgggaccgtgaaaaagcaggattttctgcatgcctggaaacaggccttt
ggtgaaggtagcgaacataaactgacactgaaatgcgataaagagatgctgactgaaatc
cgtatttcactgccagccaccattgccgatgacgcaacgctaacgcagctactgcaacaa
gccgcgaccgtacgtccaggcaattgtggccgtaaattccggattgaccgaccttag
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