Shewanella dokdonensis: KHX94_09135
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Entry
KHX94_09135 CDS
T07469
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00860
Porphyrin metabolism
sdk01100
Metabolic pathways
sdk01110
Biosynthesis of secondary metabolites
sdk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KHX94_09135 (hemN)
Enzymes [BR:
sdk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
KHX94_09135 (hemN)
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
QVK24573
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Position
complement(1896853..1898229)
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AA seq
458 aa
AA seq
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MKQPTHISWDQSMIEKYNYSGPRYTSYPTALEFDESFTEGDLLSAIANSKGEHLSLYVHV
PFCAKLCYYCGCNKIVTRHQHKADQYIEYLAKEIVTRAPLFKHYKVTQMHWGGGTPTFLS
PEQILRLTSLLKANFDFADEGEFSIEVDPREIELSMLDTLKEAGFNRISIGVQDFNKEVQ
VAVNREQDEQFIFDLINKAKAMGFVSTNVDLIYGLPYQTPETFAQTISKILELSPDRLSV
FNYAHLPARFAAQRKIKEENLPTPQQKLEILQYTIETLTGAGYQYIGMDHFAKPDDELAK
LQREGRLHRNFQGYTTQPECDLLGLGVSSISQIGDCYAQNQKDIHPYYEAIEATGHALWK
GCKLNRDDEIRRAVIKQLICHFELDMAKMEQQLGIQFEQYFAEDLKLLQTFIDDKLVTIE
DRKIAVSSTGRLLIRNICICFDVYFREKARQQQFSRVI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcagcccacacatatcagttgggatcagtcgatgatcgaaaagtacaactacagc
ggcccgcgttatacttcttatcccaccgcgctggagtttgatgaatcatttactgaaggc
gatttactgtcggcgattgccaacagtaaaggcgaacatctgtcgctgtatgtccatgtg
cccttctgcgccaagctgtgttactactgtggttgtaacaagatagtgactcgtcaccag
cacaaggcggatcagtatattgaatacctggcaaaagagattgtgactcgtgcgccactg
ttcaagcactacaaagtcacccagatgcattggggcggcggtacaccgactttcctgtca
ccagaacaaattctacgactgacttcactgctcaaagcgaactttgattttgccgatgaa
ggcgagttctctattgaagtggatccacgagaaatcgaactgtccatgttagatacgttg
aaagaagccggatttaaccggatttctatcggggtacaggacttcaataaagaggtacag
gttgcggttaaccgtgagcaggacgaacagtttatctttgacctgatcaacaaagccaaa
gccatgggttttgtttctactaacgtggatctgatctacggcttgccttatcagacccca
gaaacatttgcccaaaccatcagcaaaattctggaactgtcgccagatcgtttatctgta
ttcaactatgcccacctgccggcacgttttgccgcacagcggaaaatcaaagaagagaat
ctgccaacaccacaacagaagttggaaattctgcagtacaccatcgaaaccttgactggt
gcagggtatcagtacatcgggatggatcactttgccaaacctgacgatgagttagcaaaa
ttgcagcgtgaaggtcgtctacaccgtaacttccagggctacactactcagccggaatgt
gacctgttaggccttggcgtatcgtccatcagccaaattggtgattgctacgcgcaaaac
cagaaggatattcatccttactatgaagcgattgaagctaccggccacgcgctatggaaa
ggctgcaagctgaaccgcgatgacgaaatccgccgcgcggtgatcaaacagcttatctgc
cacttcgaactggatatggcgaagatggaacagcagttagggattcagtttgaacaatac
ttcgcagaagatctgaagctgttacagacctttatcgatgacaagctggtgactatcgaa
gatcgtaaaatcgccgttagttctactggccgcctgttgatccgcaatatctgtatctgc
tttgacgtgtacttccgtgagaaagcacgtcagcaacagttctctcgggtaatttaa
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