KEGG   Shewanella dokdonensis: KHX94_10155
Entry
KHX94_10155       CDS       T07469                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sdk  Shewanella dokdonensis
Pathway
sdk00061  Fatty acid biosynthesis
sdk00071  Fatty acid degradation
sdk01100  Metabolic pathways
sdk01212  Fatty acid metabolism
sdk02024  Quorum sensing
sdk04146  Peroxisome
Module
sdk_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sdk00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    KHX94_10155
   00071 Fatty acid degradation
    KHX94_10155
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    KHX94_10155
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KHX94_10155
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sdk01004]
    KHX94_10155
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdk04147]
    KHX94_10155
Enzymes [BR:sdk01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     KHX94_10155
Lipid biosynthesis proteins [BR:sdk01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   KHX94_10155
Exosome [BR:sdk04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   KHX94_10155
  Exosomal proteins of breast cancer cells
   KHX94_10155
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: QVK21897
LinkDB
Position
2108918..2110576
AA seq 552 aa
MSASYKSPVEMLAQWADVQGDAVYLRQPIKGQFRDYSWRQVQQTVQRLAGALRHLGYQPG
DKIALLSKNCAEWFITDLALMYGGYISVPIYPTANADTIRYVLEHSGSKAIFVGKLDHWA
EQETGVGGELLRLALPYDTMPAQYQWLQLLNMGQPLLEAPEPLPEQVMTLIYTSGSTGKP
KGAVQTFASYSWTCNAVVRDLKANQQDRLLSYLPLAHITERVAIEGSSFYAGCPVAFVES
LDTFVTDVQRMQPTVFFSVPRLWTLFQKNIIDKVGSFNKLNLLLKIPLLNWLVKRKIHQG
LGLGKSRLLGSGSAPIPPSLVQWYHSIGLDICEAWGMTENCAYSIINYPFDASKIGTVGK
PIVGCSIKRAADGELLVKSPGLMKEYYQAPEATAAAFDEEGYFRTGDLCEIDKEGCVSIT
GRVKDNFKTAKGKYVAPVPIERKLAQDPHVELLCVIGSGLPHPVALVQLAEGATLQPREE
VRASLKATLDAINPNLESHETVDAIVVVNEPWTIENDVLTPTLKIKRHVLEQRYTAKVDG
CRGAVVVWEDEI
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgtcagcatcgtataaaagcccagtagaaatgttagctcagtgggctgatgtccagggg
gacgcggtgtatttgcggcaaccaataaaaggtcagttccgcgattacagttggcgtcag
gtacaacaaaccgtgcaacgtctggcgggagcgctacgccatcttggctatcaaccagga
gacaaaatagctctgttgtcaaagaactgtgcggaatggtttatcacggatctggcgctg
atgtacggcggctatatcagtgtgcctatctatccaaccgctaacgctgacactatccgt
tatgtgctggaacatagcggcagcaaagccatttttgtcggtaagctggatcactgggcg
gaacaggaaacgggcgtcggtggtgaattactgcgcctggcactgccttacgatactatg
cccgcccaatatcaatggttgcagttgttgaacatggggcaaccgttactggaagcgcca
gagccattacctgaacaggtaatgacgcttatttatacgtcaggttctaccggtaagccc
aaaggtgccgtgcaaacttttgccagttacagctggacctgtaatgccgtggtgcgcgat
ctcaaagccaaccagcaagatcgcttattatcctatttgccattggcacacatcacagag
cgtgttgccattgaaggctcatcattttatgcgggctgcccagtcgcctttgttgagagc
ctagatacctttgttacggatgtgcaacggatgcagcctaccgtgtttttctcagtgcca
aggctgtggaccttgttccagaaaaatattatcgacaaggtcggtagctttaacaaactg
aatctgctgctgaaaattccactactgaattggttagtaaaacgtaagatccatcaaggg
cttgggctgggcaagtcacgactattaggttcaggttctgcccctattccaccgtcactg
gtgcagtggtatcacagcattggactggatatttgtgaagcctggggaatgactgaaaac
tgtgcttactccattatcaattatccgtttgatgccagcaaaattggcaccgttggtaag
ccgatagttggttgcagcattaaacgtgcggctgacggcgaattactggtcaaaagccca
gggttgatgaaagagtattaccaagcgcccgaagccaccgccgccgcttttgatgaagag
ggttatttccgcactggcgatctgtgtgagattgataaagagggttgtgtcagcattacg
ggtcgcgtgaaagacaacttcaaaaccgctaaaggcaagtatgttgcacctgtgccaatt
gaacgtaaactggcacaggatccacatgttgaactgctgtgtgtgattggttctggtctg
cctcatccggtggcactggtacaactcgcagaaggggcaacactgcaacccagagaggaa
gtaagggcatcgctgaaagcgacactggatgccattaatcccaacttagaatcccatgag
acagtcgatgccatcgtcgttgtgaatgagccatggactatcgaaaatgatgtgttgacc
ccgacactgaaaatcaaacgccatgtgttagagcaacgctacacagctaaagtcgacggc
tgtcgaggggcagtggttgtctgggaagatgagatttaa

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