Shewanella dokdonensis: KHX94_10955
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Entry
KHX94_10955 CDS
T07469
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_10955
Transporters [BR:
sdk02000
]
Other transporters
Pores ion channels [TC:
1
]
KHX94_10955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF4923
Motif
Other DBs
NCBI-ProteinID:
QVK22003
UniProt:
A0ABX8DBN2
LinkDB
All DBs
Position
2279023..2281188
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AA seq
721 aa
AA seq
DB search
MLRGFRGNQLALVISLVLAGPALAAQPLANNASEKPKADKDKTEVIVVVGERENKDGYRP
KTVDLGPLGTRSLKDTPYAISIFNRELMDSVNATSLNDVLKYMPSTQMEARGGTDIGRPQ
TRGMEGGVVDNNHLDGMNVVATTAQPMELYERIEVIQGLTGALYGPASPAGNFNYVFKRP
TQDYYNAVSAGMTDDGAWLLHADTGGSPNKYFGYRVNLLQEEGDGYVSGSHLNRKLAGLA
LDINPGENTVVQLNGSYYKFDKFGYPGGFSYASSIDLPSAMDPTKRGYGQVFSGSSLETT
TGSGKVIHQLNENWKLSAGALYQEAKRTLTGATNTLNADGTFTSRMSTSGAAGKFTVTSN
MANLTGRVNTGSVSHDLVFGTTGYSWKIYSATGRSSAVLGTSPIDEPQVYDSPEINLHVP
TYKSGNTKVQSGIIGDTITWNDYLSTMLIGSYSDFDVSNYNRNGDKTGNYSKDGVSSTVS
MIFKPIAEISTYITYADSLEAGGSASVDAQNAGETLDPVRSYQTELGAKASLGDFDINAA
VFRVKRPLAYESEDGYYRQQGMQRNNGAELSINGYLTPELKIYGGVTYLDAELQDSYDPR
TAGKEVVGVAKWQGNLLAEYTVEQLAGVSFNANVHYTGKRAANNINSTWASSYTTVDIGA
KYVIPKFIGSETTLRLNVTNLFDRDYWAAIFPGNIYGTPGASNTAFLGEPRQIRLTATVK
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggggattccgagggaaccagctcgcgctggttatcagtctggtattggctggc
ccagcattggctgcacagccgctggcgaacaatgccagcgaaaagcctaaggctgacaaa
gataaaactgaagtaattgtcgtggtgggagaacgtgaaaataaagacggttatcgtcca
aaaaccgttgacttggggccgttggggactcggtctctgaaagataccccgtatgccatc
agtatctttaaccgggagcttatggacagtgtcaatgctaccagtttgaatgatgtgctt
aagtacatgccatcaacacaaatggaagcgcgcggcggcactgacattggtcgtccacaa
acccgtggtatggaaggtggcgtagttgataacaaccatctggatggtatgaacgtggta
gccaccactgcccagccaatggaactgtacgaacggattgaggtgatccaagggttgact
ggcgccttgtatggccccgcaagcccggctggtaactttaactatgtgtttaaacggcca
actcaggattactacaacgcagtatctgctggcatgacagatgatggtgcctggttgttg
catgctgatactggtggtagccctaacaaatactttggttaccgggttaacctgttgcag
gaagaaggggatggttacgttagcggttcccacctcaatcgtaaactggcaggtctggca
ttggatatcaatccaggggaaaacaccgttgttcaattgaacggcagctattacaagttt
gacaagtttggttacccaggtggtttttcatatgcgtcatctatcgatctgccatcggca
atggacccgactaaacggggttatgggcaagtattcagtggtagcagcctagaaaccacc
accggcagcggtaaagtgatccatcagttgaatgaaaactggaaactgagcgccggtgcc
ttgtatcaggaagccaaacgtaccctcactggggcaaccaacaccttgaatgcggatggg
acatttacttcgcgcatgtcaacttctggtgctgctgggaaatttaccgtcaccagcaat
atggcgaacttaaccggccgcgtgaacactggcagtgttagtcatgatttggtgtttggc
actaccggctatagctggaaaatctacagtgccactggccgctcttctgcggtattgggc
acttctcccatcgatgagccacaggtttatgactcaccagaaatcaatctgcatgtgccc
acatacaaatctggtaataccaaggttcagagtggcattatcggtgacaccatcacttgg
aatgactatctgtccaccatgttgattggcagttacagtgattttgatgtgtctaactat
aaccgtaacggcgataaaaccggcaattatagcaaggatggcgtaagttccaccgtgtct
atgattttcaaaccgattgctgaaatttccacttacatcacttacgccgatagtctggaa
gcgggcggtagtgcatcggtagacgcacaaaatgctggtgaaactctcgaccccgtcaga
agttatcaaacagaattgggcgcgaaagccagtttaggggatttcgacatcaatgccgca
gtgttcagagtaaaacggccgctggcatatgaaagtgaagatggttactaccgtcagcaa
gggatgcagcgtaacaatggcgcagagctgagcattaacggatatctgactcctgagttg
aaaatatacggtggggtaacctatctcgatgcggagttgcaggacagttatgacccgcgc
accgctggcaaagaagtggtgggcgttgccaagtggcaaggtaacctgttagccgaatat
accgtagaacaactcgctggcgtgtcattcaatgccaacgtgcactataccggcaaacgc
gctgctaacaatatcaatagcacttgggcgagttcatataccacagtggatattggcgcg
aagtatgtcataccaaaattcattggtagtgaaaccaccttgcgactcaatgtgaccaac
ctgttcgaccgcgattactgggcggcgattttccctggcaatatttacggcactcccggt
gctagcaatacggcatttttgggcgaaccgcggcagatccggttaaccgctaccgtgaaa
ttctga
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