Shewanella dokdonensis: KHX94_11395
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Entry
KHX94_11395 CDS
T07469
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_11395
Transporters [BR:
sdk02000
]
Other transporters
Pores ion channels [TC:
1
]
KHX94_11395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF5777
Motif
Other DBs
NCBI-ProteinID:
QVK22074
UniProt:
A0ABX8DB63
LinkDB
All DBs
Position
complement(2373774..2376176)
Genome browser
AA seq
800 aa
AA seq
DB search
MRLSVISLAVASQLVLPAVYAADNNSNIEKISVVGSRLAVRSATDTAVPVDIISAEQLEA
TGMTETAKALQFAAPSYSFPSSSVTDGTDAVRPASLRGLSPDHTLVLVNGKRYHGSALVH
LNGTAGRGSSSVDLNTIPMSAIKRIEILRDGASAQYGSDAIAGVINIVLKDASEGAEISL
QGGQTYAGDGEQWRAGLNKGIKFSENGHVDISLEAHHKNPTNRAGLDQRQQYPSLADNSP
DPREATFDRKNHQIGDGKYENLALFFNGAQYFGDDKLYFFGGISHRENESGAFYRRALDA
RNILDIYPDGFLPKLAPKIKDYSATVGYAFSVGEWKLDAAAGFGRNDFEYYVKNSLNASY
GPDSQTSFYDGTLTTEETNLTLDASRYLPFYNDSELLLALGVAYRNNTYQIEAGEAASYA
NGGYDNRSAGSQGFTGFTPASEVDESRHNTGLYAEVENQLTRDFYWAAAVRYEDYSDFGS
NTTWKLAGRYDLTDKLAFRATANTGFRAPSVQQLYFTNISTLFVSDPDTGELVPTESGTF
NSLSPVAQALGVSELKPEKSTSFSGGLVYTGDNGMTITLDAYQIDIDDRIILSSSLTPSD
SAAVAAALSGTNAESARFFINGVDTRTKGVDLVVSQNFELGSYGDLAASMVYAYNKNEIR
NIHLPSLLDGLEDQLFDHVEQVRMTDSSPQNKGSLNLTHHYGDFKTNLRFNFFGDYKVGL
STGADLDYGAKTTTDLSVAYTATDNLTLTVGAQNLFDVYPDRAKTEPTDQSFGGIFKYPV
GNTPFGMNGGYYYLQARYTF
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgtcatctctctggcggttgccagccagctcgttctgccagcagtctac
gcggcggacaataatagcaacatcgaaaaaatctctgtggtaggttcccgtctggcggtt
cgcagtgccacagatactgcggtacctgtcgatattatttcagcggaacagctggaagcc
accgggatgactgaaaccgcgaaagccctgcaatttgccgcaccgagctacagttttcca
tcatcatccgttaccgatggtactgatgcggtacggccagccagtttgcgaggactttcg
ccagatcacacactcgtgttggtcaacggcaagcgttatcacggttcggcactggtgcac
ctcaacggcaccgcaggtcgtggctcttcgagcgtggacttgaacaccatcccgatgtcg
gccattaaacgcatcgagatcctgcgcgatggcgcctctgcacagtatggttccgatgct
atagccggggtgataaacattgtgctgaaagacgccagcgaaggcgctgaaatttcactg
caaggcgggcaaacctatgctggcgatggcgagcagtggcgcgcaggtcttaataaaggc
ataaagttcagtgaaaacggacatgtggatatttcactggaagctcaccacaagaatcca
accaatcgcgccggattggatcagcgccaacaatatccttcactggcagataatagccct
gatccacgggaagccactttcgaccgtaaaaaccaccagattggtgacggcaagtatgaa
aacttggccttgttttttaacggtgcgcagtattttggcgatgataaactgtatttcttc
ggtggtatcagtcaccgagaaaacgaatctggcgcgttttatcgtcgcgccttagatgcg
cgtaacatcctggatatttacccagacggctttttgcccaaattggcccctaagattaag
gactactctgccaccgtcggctatgcctttagtgtgggagaatggaaactggatgccgcc
gcaggttttggccgtaatgactttgaatactatgttaaaaacagcctcaacgcgtcttat
ggccctgacagtcagaccagcttctacgatggcaccttgaccaccgaagaaaccaacctg
acgctggatgcttcgcgctacctgccattctataatgattcggagctgctgctggcgctg
ggtgtagcttatcgtaataacacttatcagattgaagcgggtgaagccgcctcctatgcc
aatggtggttacgataaccgctcggcgggcagccagggctttaccgggttcacgccagcc
tcagaagtggatgaaagtcgtcacaataccgggctttatgctgaagtggaaaaccagctg
acgcgagatttctactgggcagcagcggtgcgttatgaagactattctgactttggtagc
aataccacttggaaactggccggacgctatgatctgaccgataagttagccttccgcgcc
accgccaataccggtttccgcgcccccagcgtgcaacagttatatttcaccaatatctcg
accttgtttgtgtccgatcctgataccggagagctagtcccaacagaatccgggacgttc
aacagcctgtcacccgtggcacaggcactgggcgtcagcgaactgaaaccggaaaaatcc
acctcgttcagcggtggtctggtgtataccggagataacggcatgacgatcacactggac
gcctaccagattgatattgatgaccgcattatcttgtccagttcactgacaccgagtgac
tcagcagccgttgccgcggcactttcaggcactaatgccgaatctgcccgcttctttatc
aacggtgttgatacccgcactaaaggggtagatctggtggttagccagaactttgaactc
ggaagttacggtgatcttgccgccagcatggtgtacgcctataacaagaatgagatccgc
aatattcatctgccatcgctgttagacggcctggaagaccaactgtttgaccatgttgaa
caggtgcgaatgaccgattcttcaccgcagaataaaggcagtctgaatttgacccaccac
tatggtgatttcaaaaccaatctgcgcttcaatttctttggtgactataaagtgggcttg
tccactggtgctgaccttgattatggtgccaaaaccaccacagatctttctgtggcttat
acggcaacagataatctgactctcacggttggtgcacaaaacctgtttgatgtgtatcca
gatagagccaagaccgaacctaccgatcagagctttggcgggatcttcaaatacccagta
ggtaacaccccgtttggcatgaatggcggttactactatttgcaagcacgttacactttc
taa
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