Shewanella dokdonensis: KHX94_11945
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Entry
KHX94_11945 CDS
T07469
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01959
pyruvate carboxylase subunit A [EC:
6.4.1.1
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00020
Citrate cycle (TCA cycle)
sdk00620
Pyruvate metabolism
sdk00720
Other carbon fixation pathways
sdk01100
Metabolic pathways
sdk01120
Microbial metabolism in diverse environments
sdk01200
Carbon metabolism
sdk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KHX94_11945
00620 Pyruvate metabolism
KHX94_11945
09102 Energy metabolism
00720 Other carbon fixation pathways
KHX94_11945
Enzymes [BR:
sdk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
KHX94_11945
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_3
DUF1611_N
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QVK24847
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All DBs
Position
2493074..2494519
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AA seq
481 aa
AA seq
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MQFSNKEVTFCDQKILIANRGEIAVRIIRACAEMGIRSVAVYSDADRHALHVKRADEAYS
LGDDPLAGYLSPQRLVSLAVETGCDALHPGYGFLSENPELAELCAERGVKFVGPNAEIIR
RMGDKTEARRTMMAAGVPCTPGTEGNLENLAEALREAARIGYPVMLKATSGGGGRGIRRC
NNPEELTQQFPRVISEATKAFGSAEVFLEKCIINPKHIEAQILADSFGNTVHLFERDCSI
QRRNQKLIEIAPSTQLTPEQRAYIGKMAVRAAQAVNYENAGTVEFLLSGDEIYFMEMNTR
VQVEHTITEQITGIDIVREQIRIASGQALSVKQEDIRHRGFALQFRINAEDPKNNFFPSF
GRITRYYAPGGPGVRTDTAIYTGYVIPPYYDSMCLKLVVWALNWEDALDRSLRALDDMRV
QGVKTTAPYYQQILRNPEFRTGQFNTSFVETHPELLDYSEKRRPEQLALAIAAAIAANAG
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atccaatttagtaacaaagaggttactttctgtgatcaaaaaattctcatcgccaatcgc
ggtgaaattgcggtgcgcattattcgtgcctgtgccgaaatgggtattcgttcggtggcg
gtgtattcagatgccgatcgccatgcgctgcacgtaaaacgtgctgatgaggcctatagc
ctcggggacgatcctttggcggggtatctaagcccgcaacgtttggtgagcttagcggtt
gaaaccggttgcgatgcattgcatcccggttatggttttttgtcagaaaacccagaactg
gcggagctgtgtgccgagcgtggtgtgaagtttgtcggccctaatgctgagattatccgc
cgtatgggtgataaaaccgaggcgcgccgtaccatgatggccgcgggtgtgccttgtacg
cccggcaccgaaggcaatctggaaaatctggcagaagccctgcgtgaagccgcgcggatt
gggtatccggtaatgctgaaagccacatcaggtggcggtggccgtggtattcgtcgttgt
aataatccggaagaactcacacagcagtttccgcgggttatctccgaagccaccaaagct
tttggctctgcggaagtgttcctggaaaagtgcattatcaatcccaaacacattgaagcg
cagatccttgctgacagttttggtaacacagtgcatctgtttgagcgtgattgctctatc
cagcggcgtaatcagaaactgattgagattgcccccagcacccaattgacaccggaacag
cgggcttatatcggcaaaatggcagtgcgggccgcgcaagcggtgaactatgaaaacgct
ggtacggtggagtttctgctgtccggcgatgaaatctatttcatggagatgaatacccgg
gtgcaggtggagcacaccattaccgagcagatcactgggattgatattgtgcgggagcag
atccgcatcgcctccggtcaagcgctgtcggtgaaacaggaagatatccgccaccggggt
tttgcgctgcaatttcgtatcaatgctgaagatcccaagaacaattttttcccatcgttt
ggccgcatcactcgttactacgcgccaggtggcccaggtgtgcgcaccgacacggcaatc
tataccggctatgtcattccgccttattacgactccatgtgcctgaaactggtggtatgg
gctctgaactgggaagacgcgctagatcgcagcctgcgagcgttggatgacatgcgagtg
caaggggtgaaaaccacggcgccctattatcagcagattttacgtaatccagaatttcgt
accggtcagttcaacaccagttttgttgagacacatccggaactgctggattactcagaa
aaacgtcgtccagaacaactggcgctagccattgccgccgccattgcggcgaacgccggg
ttataa
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