Shewanella dokdonensis: KHX94_12180
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Entry
KHX94_12180 CDS
T07469
Name
(GenBank) phage tail tape measure protein
Organism
sdk
Shewanella dokdonensis
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Gene cluster
GFIT
Motif
Pfam:
PhageMin_Tail
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
QVK22189
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Position
complement(2533906..2536527)
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AA seq
873 aa
AA seq
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MNRLQLQVILAAVDKVTAPLKKMRGAGLKTQEAFKETRAKVKQLEQQTRQVQGYRNTAKQ
LGMTSVQLKEARDQMARLAQEMKASTAPSKSLTRSYAAAQHEAVRLKTQQQQLAISQQRQ
RTALREAGIDTRHLSRYQRELSASLARANDQLQQQKDRLEQLSARQKKLNAARQQLTNSR
AVASTLAGKGATAMATGGAGLYAGARLLAPGVEYQTAQSKVQALTRLDANSPQLKALRQQ
ARQLGADTSFTATDVSRGQAFLAMAGFTPESIRAAMPSMLDLSKAGDIDLARTADISSNI
LSAFKLPASEMTQVADVLALTMTTSNVDLEMLAETMKYMGPIAQTAGMKLSEAAAAAGLL
GNIGIQASNSGTALRAMLNRLAGPTKQAKALFEELGVNTKDAKGNMRNIITVMTDVAKAT
EKMGSADRLSIYKTLFGEEAASGMNELIGQAGSQGFAKYARQLATESRGVAKQMSQVMTD
NIKGDLDTLYSAVDDVRIQLFEGDSDNLRGLVRDITDVVRAIGGWVKANPALASGLLKGA
LAISTLAAAGGGLAVMIAGLIGPFAMLRYSTSVLGIKSLPALGRGLGLVTGLFKGLLLGI
RSLSLALLTTPFGWIVLGIAGLVTAGYLLVTHWDSVKQYLLQFWDAIKPGFVAGWNVIKQ
VFSWSPMGFIASHFADIKAFLGSLPQQFSTLGGLIMDGLIAGIQGKFTGLKDSLGNIING
SVAWVKNLLGIHSPSRVFAAIGDYTMQGLSLGLERSSDTPLQSVASLSKTLKATTLSLGL
ASTPMLATANETDQPTPGAQETSPLTLTHARGANPRPSQPAAVYIDAGINAPITIQTQPG
MDNQAILTLLHQELDRREQQQQARLRSCLQDLE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaatagattacagctccaggtgattttagccgccgttgacaaggtcaccgccccactg
aaaaagatgcgcggcgccggtttaaaaacccaagaagctttcaaagagactcgcgccaag
gtgaagcagctggagcagcagacccggcaggtacaaggctatcgcaacaccgccaagcag
ctaggcatgacctcggtacagcttaaagaagcgcgggaccagatggcccggctggcgcag
gagatgaaggccagcaccgcacctagtaaatccctgacccgcagttatgcggccgcgcag
cacgaagcggtacggctcaagacccagcagcaacagctggcaatttcacagcagcggcag
cgcactgccctgcgtgaagcgggcattgatacccgtcacttaagccgctatcagcgggaa
ctttccgcgtcactggcacgtgccaatgaccagctccagcaacaaaaagaccgcttagaa
caactctctgcaaggcagaaaaagctcaatgctgcgcgccagcaactgaccaacagccga
gccgttgcctcaaccctcgctggcaaaggcgctaccgccatggcaaccggtggcgccggg
ctttatgccggggcgcgcttgctggcacccggggtggaataccagaccgcccagtccaag
gtacaggcgctcacccgcctggatgccaacagcccacagcttaaagcgctacgccagcag
gcccggcaactgggggccgataccagttttactgccactgatgtgtcccgcggtcaggcg
tttctcgccatggccggctttacccctgagagcattcgggcggccatgccgtccatgctc
gatttgtccaaagcgggcgatattgacctggcccgcaccgccgatatcagctctaacatc
ctgtccgcattcaagctgccagccagtgagatgacccaggtggccgatgtgctggcactg
accatgaccacctctaacgtggacttggagatgctggccgaaaccatgaagtacatgggg
ccgattgcacaaacggcgggcatgaagctttccgaagcggccgccgcggcgggcctgctc
ggtaacatcggcatccaggcatccaactccggtaccgcactgcgcgccatgctcaaccgt
ctggccggtcctaccaaacaggccaaggcactgtttgaggaactaggcgtcaacaccaaa
gacgccaagggcaatatgcgcaacatcatcacggtgatgaccgatgttgccaaggccact
gaaaagatgggctccgctgaccgcctgagcatctacaagaccctgtttggtgaagaagcc
gccagcggcatgaatgaactgataggccaggccggcagccagggctttgccaagtatgcc
aggcagcttgccaccgaaagccgcggcgtagccaaacagatgtcgcaggtgatgaccgat
aacatcaaaggcgatttagatacgctttattccgccgtggatgatgtgcgtatccagctg
tttgaaggcgatagcgataacctccgaggccttgtccgggacattaccgacgtggtgcgt
gccatcggcggctgggtaaaagccaacccggcactggcgagcggcctgctcaaaggggca
ctggctatctccaccctggccgcggccggcggcgggctggcggtgatgatagccggcttg
atcggtccctttgccatgctgcgctacagcaccagtgtgctcggcatcaagtcactgccc
gcccttggccgtgggctgggactggtcaccggactgttcaagggcttgctgctggggata
cggagcctgtcgctggcgctgctcaccacgccgtttggctggatagtgctggggattgcg
gggctggtgaccgccggctacctgctagtcacccactgggacagtgttaaacaatacctg
ctgcagttctgggacgccatcaagcccggattcgtggctggctggaatgttatcaagcag
gtgtttagctggtcacccatgggatttattgccagtcactttgccgacatcaaagccttt
ctgggcagcttgccgcagcagttcagcaccttgggcggccttatcatggatgggctgatc
gccggcatccagggcaagtttaccggtctcaaggattcactgggcaacatcatcaacggc
tcggtggcttgggtgaaaaacctgctgggcattcactcgccgagccgggtatttgccgcc
attggtgactacaccatgcagggcttatcgctggggcttgagcgctcgagcgacaccccg
ctgcaatcggtggcaagtctcagtaaaaccctcaaggccaccacgctatcgctcggtctt
gccagcaccccgatgctggcaaccgccaacgagacggaccaacccacgcccggcgcgcaa
gaaacatcaccactgaccctgacccacgcgcggggtgccaaccctcggccgagccaaccc
gcagcggtttacatcgatgctggtatcaatgcgcctatcaccattcagacgcaacccggc
atggataaccaggccatcctgacgctattgcatcaagagctggaccgccgtgaacaacag
cagcaggcacgccttcgcagttgcctgcaggatttggagtaa
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