KEGG   Shewanella dokdonensis: KHX94_12385
Entry
KHX94_12385       CDS       T07469                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sdk  Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:sdk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdk03032]
    KHX94_12385 (parE)
   03036 Chromosome and associated proteins [BR:sdk03036]
    KHX94_12385 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sdk02048]
    KHX94_12385 (parE)
Enzymes [BR:sdk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     KHX94_12385 (parE)
DNA replication proteins [BR:sdk03032]
 Prokaryotic type
  DNA Topoisomerases
   KHX94_12385 (parE)
Chromosome and associated proteins [BR:sdk03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    KHX94_12385 (parE)
Prokaryotic defense system [BR:sdk02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    KHX94_12385 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C
Other DBs
NCBI-ProteinID: QVK22223
LinkDB
Position
2565526..2567412
AA seq 628 aa
MTNQYTSDAIEVLNGLDPVKRRPGMYTDTTRPNHLGQEVIDNSVDEALAGFASKIDVILH
PDNSLEVIDDGRGMPVDIHPEEGIPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVN
ALSKRVEVTVRRDGQVYDIAFEHGDRVEALHVTGSCGRRNTGTRVQFWPEAQYFDSINYS
ISKLTHLLRAKAVLCPGLRIRFVNKQSGEEQEWFYEAGLTDYLKDSIKDALTLPEEPFVG
SISTKIEAADWAITWLPEGGECLNESYVNLIPTPLGGTHVNGFRQGLLESMREFCEFRNL
IPRGVKLSPEDIWDKASFVLSVKMQDPQFAGQTKEKLSSRQCAAFVSGIVRDAFSLWLNS
HTDQAELLAEMCISNAQKRLKSAKKIARKKVTAGPALPGKLTDCTSQDNHRTELFLVEGD
SAGGSAKQARDKEFQAIMPLRGKILNTWEVDGSQVLGSQEVHDISVAIGCDPDSDDISEL
RYDKICVLADADSDGLHIATLLCALFLKHFKILVEQGHIHIAMPPLFRIDIGKEVHYALD
EEEKQSILSRIAADNKKGKVQVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDVEETV
AMMDMLLSKKRAGDRKSWLETKGDLAEF
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgacaaatcaatacacctccgatgccattgaagtgctgaacggactagatccggtcaaa
cgtcgtcctggcatgtatacggacaccacgcggcccaaccatttgggacaggaagtgatc
gacaatagtgtcgatgaagcgttggcgggatttgccagtaaaattgatgtgattttgcat
ccagacaactccctggaagtcatcgatgatggccgtgggatgccggtggatattcaccca
gaagaaggcatcccaggggttgagttgatcctcaccaaactgcatgccggtggtaaattt
tccaacaaaaactatcaattttccggtgggttacacggtgtaggtatctcagtggtcaat
gcgctgtcaaagcgggttgaagtcaccgttcgccgcgatggtcaagtctatgatattgcc
tttgagcatggcgatcgtgttgaagctttgcatgtcactggtagctgtgggcgccgtaat
accggcacccgtgtacagttctggccagaagcgcaatattttgattctattaattattcc
attagcaaactgactcatttgctgcgtgctaaagcggtgttgtgtcccggtttgcgcatt
cgttttgtcaataaacagtcgggtgaagaacaagaatggttctatgaagccggtcttacc
gattacctaaaagattcaattaaagatgcgcttacattaccggaagagccgtttgtgggc
agcatcagcactaagattgaagctgccgattgggccattacctggttgcctgaaggtggc
gaatgtctcaatgaaagttatgtcaatttgatccccactccgctgggcggtacgcacgtg
aacggctttcggcaagggttgctggaatccatgcgtgagttttgcgagtttcggaacctg
atcccccgtggcgtgaaactgagcccagaggatatttgggataaagcctcatttgtgctg
tcggtcaagatgcaagacccgcagtttgctgggcaaaccaaagagaagctgtcgagccgt
caatgtgctgcttttgtgtctggcattgtgcgtgatgcttttagtctatggcttaacagc
cacactgaccaagccgaactgttagctgaaatgtgtatcagcaatgcacagaaacgcttg
aaatccgctaagaaaattgcccgtaagaaggtcaccgccgggcccgcattaccaggaaaa
ctgacggactgcaccagccaggacaatcatcgtacagaactgtttttagtggaaggtgac
tcggccggtggtagtgctaagcaagcgcgggataaagagtttcaagccatcatgccgtta
cgcggtaagatccttaatacctgggaagttgacggttcgcaggtattgggctcgcaagaa
gtgcacgacatttccgtggctataggttgcgatccagacagtgatgatatttctgagtta
cgctacgacaagatttgcgtgttggcagatgccgactctgatggtttgcacattgcgacc
ttattgtgcgcattattcttaaaacattttaaaatcctggttgaacaaggacatattcac
atcgcgatgccaccacttttccgtatcgacataggtaaagaggtgcattacgcactggat
gaagaagaaaaacaaagcatcctcagccgtattgcggcagataacaaaaaaggtaaagtg
caggtgactcgattcaaagggctgggtgagatgaatccactgcagcttcgggaaaccacg
atggatcccaatacccgtagattggtacaactgacgattgatgatgtcgaggaaactgtg
gcaatgatggacatgttgttatccaaaaagcgggctggcgatcgcaagtcctggctggag
actaagggagatctggccgagttttga

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