Shewanella dokdonensis: KHX94_12425
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Entry
KHX94_12425 CDS
T07469
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00730
Thiamine metabolism
sdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KHX94_12425 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdk03009
]
KHX94_12425 (rsgA)
Enzymes [BR:
sdk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
KHX94_12425 (rsgA)
Ribosome biogenesis [BR:
sdk03009
]
Prokaryotic type
GTPases
KHX94_12425 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
FeoB_N
MMR_HSR1
GTP_EFTU
AAA_29
nSTAND1
AAA_16
MMR_HSR1_Xtn
AAA_22
AAA_23
ABC_tran
IIGP
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QVK22229
LinkDB
All DBs
Position
complement(2574351..2575412)
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AA seq
353 aa
AA seq
DB search
MSKKKLTHGQLRRMKANHEKRLQRGNSTETTATELQDNLLGPEQEGTVISRFGQHADVET
DSGELVRCNLRRTIGSLVCGDKVVFRQAIDANHTIPGIVEAVHERHSSLTRPDLYDGVKV
VAANIDQILIVSSVVPAFSSQIIDRYLVAAEDCGIPPVIVLNKIDLLTEEQAPAIDKALE
QYRAIGYHVYEASGRTGAGIEELKALLDDKVSIFTGQSGVGKSSLINAVLPNAQLLIGDV
SDNSGLGQHTTTTSKLLHLPSGGDLIDSPGVREFALWHLNAERVSWCFVEFRDYLGGCKF
RDCKHLDDPGCRLREAVEQGKIARERFNNYHRIIASLDEQRHARQFRAGVDDF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaaagaagctgacccatggccagttgcgccgtatgaaagcaaatcatgaaaaa
cgtttgcaacgcggcaatagcactgagactacagccactgaattacaggataatctgctg
gggccagaacaggaaggcacggtaatatcgcgctttggccaacatgctgatgtggaaaca
gacagcggtgagctcgtacgctgtaacctgcgccgtactattggcagtttggtgtgtggt
gacaaggtggtttttcgccaagcgattgatgctaatcacacaattccagggatcgtggaa
gccgtgcatgagcgccactctagccttacccgccccgatctttatgacggtgtgaaagtg
gtggcggctaatattgatcagatcctgattgtctcttccgtcgtcccagcattttccagc
cagatcattgaccgttacctagttgccgctgaagattgtggtattccgccggtgatagtg
ctcaacaagattgacttgctgacggaagaacaggctcccgcaattgataaagcgttagag
cagtatcgcgctattggttaccatgtgtatgaagccagtggccgcactggcgctggcatt
gaagagttaaaagctttgctggatgacaaggtcagcatctttaccggccagtcaggcgtg
gggaaatcgtcactgatcaatgcggtgttacccaatgctcagctgctgattggcgatgtg
tcagacaactctgggctgggtcaacataccacgacaacatcaaaactattgcacctgcca
tcaggtggcgatctgattgattctcccggtgtccgggaatttgccctgtggcatcttaat
gccgagcgcgttagctggtgctttgtggaatttcgtgattatctcggcggctgtaaattc
cgcgattgtaaacatctggacgaccccggctgccgattgcgagaagccgtcgagcagggc
aaaatcgcccgggagcgttttaacaactaccaccggattattgccagtcttgatgaacag
cgtcatgcacgccagttccgcgctggtgtcgatgatttttaa
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