Shewanella dokdonensis: KHX94_12565
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Entry
KHX94_12565 CDS
T07469
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_12565
Transporters [BR:
sdk02000
]
Other transporters
Pores ion channels [TC:
1
]
KHX94_12565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
QVK22246
UniProt:
A0ABX8DC39
LinkDB
All DBs
Position
complement(2602094..2603536)
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AA seq
480 aa
AA seq
DB search
MRSDLGYLQFTGSRLKQDYLGLPYGTDNEVAGSDGKMINSAADDKRGIIKLGITPNSTDE
YTFTYIKQDGEKQNPPYAGNSGQRARYWQWPDYNKESYYYQGFTRLNDIFTLKSRVYHDV
FTNTLMMYNSLSALQQKNGFYSRYDDFSNGAGLQLSADLRQRDQLSFAAHWKEDVHREKD
APDGLYDRYKDRTISLASEYQWAISEQFDAVAGISYDKRKSLEGMQHEDDGSITQYDDND
QHAFNWQALLKYHVNDTDSLAFSVSDRSRFPTLKERYTTSKPATGQVALVNPQLKPERAR
TFDITYSGLINAQWSYEASAYYNRVDDAILAINIDANTLQNRNSGQVDYSGVDLGLKGKI
LDIAELGLSYSYTHADVKRKEIGEITGLPKQMANAWIKVTPWEPLSLTLSEEIRDSSYGN
NDGSQIAAGFALTNLRADYQLLEGLSLNASVNNLFDRSYEYSEGFIEQGRNFWLGIEYRL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgaccttggttatctccagtttacaggcagccgcctgaaacaagattatctg
ggattaccttatggtaccgataacgaagttgcaggcagcgatggcaagatgatcaactcc
gccgccgatgacaaacgcggcattatcaagttagggatcacacctaatagcaccgatgaa
tacaccttcacctacatcaaacaggatggagaaaaacaaaatccaccttatgcgggtaac
agtgggcagagagcacgttactggcaatggccagactacaacaaagaaagttactactat
cagggatttactcggttaaatgacattttcacgttaaaaagtcgtgtttatcatgatgtc
tttaccaacaccctgatgatgtacaactcgctatctgcgctgcaacagaaaaacggtttt
tacagccgttatgatgacttcagcaacggtgcaggtttgcaactcagcgccgatttgcga
cagcgggatcaactgtcctttgccgcacattggaaagaagatgtacaccgtgaaaaagat
gcgccagatggcctctatgatcgctataaagatcgcacaatctctctggcatccgaatat
caatgggcaatttctgaacaatttgatgcagttgccggtatcagctacgacaaacggaaa
agtctggaagggatgcagcatgaggatgatggcagtatcacccaatatgacgataacgat
caacacgccttcaactggcaggcgctgctgaaataccatgtcaacgacacggattcactg
gcattttccgtctctgatcgcagtcgattcccgaccttaaaagaacgctataccacctct
aaaccggcaaccggccaagtggcactggtaaacccacagctgaaaccggaacgggcacga
accttcgatatcacttatagcggtctcatcaatgcgcaatggagctatgaagccagtgcc
tattacaaccgtgtggatgacgccattcttgcgattaatatcgatgctaacaccctgcaa
aaccgcaacagtggacaggttgattacagcggggtcgatctcggattaaaaggcaagatc
ctggatatcgccgaattgggtctgagctatagctacacacacgccgatgtgaagcgtaaa
gagattggcgagatcaccggcttaccgaaacagatggcgaatgcctggatcaaagttacc
ccttgggaaccactgagcctgaccttgtctgaagaaatccgtgactctagttacggcaat
aacgatggttcacagattgctgccggattcgccctcactaatctacgtgccgactaccag
ctacttgaaggactcagcctgaacgcctcggttaacaacctgtttgatcgcagttatgaa
tattctgaaggctttattgaacaaggccgaaacttctggctggggattgaatatcgcctg
tag
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