Shewanella dokdonensis: KHX94_12610
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Entry
KHX94_12610 CDS
T07469
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_12610
Transporters [BR:
sdk02000
]
Other transporters
Pores ion channels [TC:
1
]
KHX94_12610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF6181
Motif
Other DBs
NCBI-ProteinID:
QVK22255
UniProt:
A0ABX8DBW0
LinkDB
All DBs
Position
2611500..2613599
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AA seq
699 aa
AA seq
DB search
MQFPSLISVAVLSALYATPSLADEMAKASDNNIERVTVVGRAQSLYRSNDGSLATRTNTP
IERTPQSIQILPESLIEDQAALEVTDLYRSISGVSQYAYSAVTFRGFRQDEILYDGVRGD
PFNGFAIPQLFNIQQVQVLKGPSGAIYGAGSPGGLINYVTKKPAYQHNNSIKLGLGNDDF
TNGSVELTGPVTEKGDQRYRLGVYQDHENPYRYNTDVRNRIIDAGYAFDLGDSTTLTLQL
TDVKQNYGGARLRGIPADRAGNFLASMRWNSNEKSDYQRLDATVYQARLEQDINSWLSGN
VTLRYFENTEEQKYHEPTSMEDTDADGVADWAARQYRNQTRDTKAGSVTGNLVAELGQHT
LLLGGDLFRQKEGFYYLRATASGGVLGLSYTDPQYGVTDVASYQQKLNTDSDTTALRYGV
YFQDQWRITEAWDVLTGVRLDGFDDKVVDNLQVSRDDYDDSGISYRIGSTYKINEHLHPY
VTWATGFVPQDAASQLSSKGGPFDPEESKLAEAGVRSFWFDNAININVAAYHIVRENILQ
TNPSDTDKLEALGKVRSRGLELDVLGDLTEHWVLNLSYAYNDTVVKDATNGISRAYSDRF
SNAPRHQLGLWSRYDITALNSAIAFGADYVSEQFDQEGGRIKPYTVFDASWQSHWQNWQF
QLNIKNLFNKEYAVSGLINRTGQFPGEHRRLYASVTYHF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttccttcactgatttctgttgctgtactcagtgcgttatacgctacccctagt
ttggctgatgagatggccaaagcgtctgataacaatattgaacgtgttactgtggttggt
cgggcgcagtctttgtatcgtagcaatgatggttcgttggctacccgcaccaacacgccg
atcgaacgcaccccacaatcaatccagattttgccggaaagcctgattgaagatcaggcc
gcacttgaagtcaccgatttataccgctctattagcggtgttagccagtatgcttattcg
gcggtgacgtttcgcggatttcgtcaagatgagatcctctacgatggtgtgcgtggcgat
ccgtttaatggttttgccatcccgcaactattcaatattcaacaagtacaggtgcttaaa
gggcctagtggcgctatttatggcgcgggttctcctggtggcttgatcaactatgtcacc
aagaaaccagcatatcagcacaataacagcatcaagctgggcttaggcaatgatgatttt
accaatggcagtgtcgagctgactggcccggtgactgagaagggtgatcaacgttatcga
ttaggcgtttatcaggatcatgaaaatccgtatcgctacaacaccgatgtgcgcaaccgt
attatcgatgctggctacgcgtttgacttaggtgatagcactacgctgacattacaactg
acggatgtaaaacagaattatggtggtgcgcggttacgaggtatcccagcagatcgcgcc
gggaatttcctcgccagtatgcgttggaacagcaatgaaaaatccgactatcagcggctg
gatgccactgtttatcaggcacggttggagcaggatatcaacagttggctcagtggtaat
gtgacgctgcgttatttcgaaaacaccgaagagcagaaatatcatgagccaacgagcatg
gaagataccgatgctgacggtgtcgcagactgggcagctcgccagtatcgcaaccagacg
cgtgacaccaaggccggatcggtgacgggtaatttggtggcggaattaggacaacatact
ttactgctcggcggtgatctgttccggcagaaggaagggttttattatctgcgcgccacc
gcatccggcggggtgctggggctgagttacactgatccgcagtatggtgtaacggatgtg
gccagttatcagcaaaagctgaatacagactctgataccaccgcgttacgttatggggtg
tacttccaggatcaatggcgcattaccgaggcttgggatgtgctgaccggggtgcgtctg
gatggttttgatgacaaagtggtcgacaatctccaggtcagccgggatgactatgatgac
agcggtatcagttaccgcattggcagcacctacaagatcaatgaacatctgcatccgtac
gtgacttgggccacgggctttgtgccgcaggatgctgccagccagctcagcagcaagggc
gggccgtttgatccagaggaaagcaagttggcggaagcgggggttcgtagcttctggttt
gataatgcgataaatatcaatgttgcggcctatcacatagtgcgtgaaaacattctgcaa
accaatccatcggataccgacaaactggaggctttggggaaggtgcgcagtcgtggactg
gaactcgatgtgctgggggatctgaccgagcactgggtactgaatctaagctatgcctac
aatgataccgtggtaaaagatgccaccaatggtatcagccgggcgtatagcgatcgcttt
tccaacgcgccgcgccatcagttaggcttgtggagtcgttacgatattaccgcgctcaat
tccgccattgcctttggtgctgactatgtcagcgagcagtttgatcaagaaggtggccgc
atcaaaccttacacagtatttgatgcctcatggcagagccactggcaaaactggcagttc
cagctcaacatcaagaatttgtttaacaaggaatatgccgtcagtggtctgatcaatcgc
actggacaattccccggtgaacatcggcggctttacgcgtcggtcacttatcatttctag
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