Shewanella dokdonensis: KHX94_13045
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Entry
KHX94_13045 CDS
T07469
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sdk
Shewanella dokdonensis
Pathway
sdk02020
Two-component system
sdk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KHX94_13045 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KHX94_13045 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdk03000
]
KHX94_13045 (crp)
Transcription factors [BR:
sdk03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
KHX94_13045 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
HTH_24
HTH_28
HTH_23
MarR
MarR_2
Sigma70_r4
HTH_36
HTH_11
GntR
TrmB
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QVK22329
LinkDB
All DBs
Position
complement(2703376..2704011)
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AA seq
211 aa
AA seq
DB search
MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEGSDTLYYIVKGSVAVLIKDDEGKE
MILSYLNQGDFIGELGLFEEQAERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLAA
QMAHRLQNTSQKVGNLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQNLIQAHGKTIVVYGTR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctctgattggtaagccaaaaccggatccgactttggaatggtttttatctcactgt
cacattcataaatatccagccaagagcacattgatccacgccggtgaaggttctgatacc
ctctattatattgtgaagggttccgtcgcagttctgattaaagacgacgaaggcaaggag
atgatcctgtcttatctgaaccaaggtgactttattggtgaattaggcttgttcgaggaa
caagcggagcgtactgcctgggttcgagcgaaacaagcgtgtgagattgccgaaatttcc
tataagaaattcaagcaattgatccaggtaaacccagaaattctgatgaagctggcagcg
cagatggcgcatcgtctgcaaaacaccagtcagaaagtcggtaatctggcgtttctggat
gtggcaggccgtatcgcccaaacattgctgcatttggctaaacagcccgatgcgatgact
catccagacggcatgcagatcaagatcacccgtcaggaaattgggcagattgtgggctgt
tcccgcgaaaccgttggccgtattctcaagatgctggaagagcaaaatcttattcaagca
cacggtaagaccatagtggtatacggaacccgttaa
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