Shewanella dokdonensis: KHX94_13935
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Entry
KHX94_13935 CDS
T07469
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00260
Glycine, serine and threonine metabolism
sdk00630
Glyoxylate and dicarboxylate metabolism
sdk00670
One carbon pool by folate
sdk00785
Lipoic acid metabolism
sdk01100
Metabolic pathways
sdk01110
Biosynthesis of secondary metabolites
sdk01200
Carbon metabolism
Module
sdk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KHX94_13935 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KHX94_13935 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KHX94_13935 (gcvP)
00670 One carbon pool by folate
KHX94_13935 (gcvP)
Enzymes [BR:
sdk01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
KHX94_13935 (gcvP)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QVK22450
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All DBs
Position
2910160..2913048
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AA seq
962 aa
AA seq
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MTKQTLTQLEQHDLFIRRHIGSDETQQQQMLDYVGAESLDDLTAQIVPGSIRLNRELALD
DACGEAAGTESIKLIAAKNKVFKSYIGMGYYGTEVPAVIQRNVLENPGWYTAYTPYQPEI
AQGRLEAILNFQQLSMDLTGLDLASASLLDEATAAAEAMAMAKRISKAKKANIFYVADDV
FPQTLDVVKTRAECFGFEVLVGPADEAVNHEIFGALFQYSNKQGAIRDYTSLFAQLHQQK
AVVAVAADIMSLVLLKSPGSMGADIAFGNTQRFGVPMGYGGPHAAYFVTKDEHKRSMPGR
IIGVSKDTRGNVALRMAMQTREQHIRREKANSNICTAQILLANMASFYAVYHGPDGLKTI
ANRIHRLTDILAAGLQAKGVTLLNSTWFDTLTFKVADKDAVIARALAAQSNLRIDADGAL
GVSLDETTTRADVATLFDIILGTGHGLDITALDTAIVATGSNSIPAALLRDDAILTHPVF
NRYHSETEMMRYIKHLENKDLALNHSMISLGSCTMKLNAAVEMQPISWPEFANLHPFCPQ
VQAEGYHELVQNLSDWLVEITGYDAVCMQPNSGAQGEYSGLLAIRRYHQSRGEAHRNVCL
IPQSAHGTNPASAHMAGMQVVVVECDKQGNVDMDDLRAKASDMAANLSCIMITYPSTHGV
YEETIRDICQVIHQHGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFAIPHGGGGP
GMGPIGVKAHLAPFVAGHSVVKLGKACDNNGAVAAAQYGSAGILPISWMYIKLLGAKGLR
LSTQNAMLNANYLAKKLSEHYPVLYRGRNDRVAHECIIDLRPLKEASGVTEMDIAKRLND
YGFHAPTMSFPVAGTLMIEPTESESKVELDRFIDAMVSIRSEIAKVAAGEWPADNNPLHN
APHTMADIMDPAFDERPYSRELAVFPCDAVRANKFWPTVNRIDDVYGDRNLFCSCVPMED
YK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaaaccctcactcagctagagcagcacgatctctttatccgccgccatatt
ggctccgatgagacccagcaacagcagatgctggattatgtcggtgccgagtctttggac
gatttgaccgcgcagatagtcccaggatcgattcgtctgaaccgggaactggcactggat
gacgcttgtggcgaagccgccggtactgagtcaatcaagctgattgctgctaagaacaaa
gtgttcaaaagttatatcggtatgggctactacggtactgaagtgccagcggttattcag
cgcaacgtgctggaaaaccccggttggtacaccgcttacacaccgtatcaacccgaaatt
gcccaaggccgtttggaagccattcttaacttccagcaactgtcgatggatttgaccggt
ttggatctggcctccgcctcactgctggatgaagccaccgccgctgccgaagctatggcc
atggctaagcgtatttccaaagccaaaaaagccaatatcttttatgtggcggatgatgta
ttcccacaaacactcgacgtggtgaaaacccgtgccgaatgttttggttttgaggtgctg
gtcggcccggctgacgaagccgttaaccacgaaatttttggcgcgctgttccagtacagc
aataagcagggcgctatccgtgattacacctcactgtttgcccaactgcaccaacagaaa
gccgttgttgccgtcgctgctgacatcatgtcgctggtgctgttgaagtctcctggcagc
atgggcgcagatatcgcctttggtaacacccagcgctttggtgtgcctatgggttacggt
ggcccacacgcggcgtatttcgtcactaaagacgaacataaacgctctatgcctggccgc
atcattggcgtatctaaagatacccgcggtaacgtggcactgcgtatggcaatgcagacc
cgtgaacagcatatccgccgtgaaaaagctaactccaatatctgtacggcgcagatcctg
ctggccaacatggcatctttctacgccgtgtaccatggccccgatggtctgaaaaccatc
gctaatcgcattcatcggctgaccgatattttggctgccggactgcaagccaaaggcgta
acactgctaaatagcacttggttcgataccttaacattcaaggtggcagacaaagacgcg
gttatcgcccgcgcgctggcggcacaaagcaacctgcgtattgatgccgatggtgccctg
ggtgtgagcctggatgaaaccaccactcgcgccgatgttgctacgctgtttgatatcatc
ctcggtactggtcacgggctggatatcaccgcgctggataccgcaattgtggcgacgggc
agcaattcgattcctgctgcactactgcgtgatgacgccatccttacccatccggtgttt
aaccgctatcacagcgaaaccgagatgatgcgttacatcaagcacctggaaaacaaagat
ctggcgctgaaccattcaatgatttccctcggttcttgcaccatgaagctcaacgccgcg
gtggaaatgcaaccgatcagctggccagaatttgctaatctgcatccattctgcccacag
gttcaggctgaaggttatcacgagctggtacagaacctgagtgactggctggtggaaatc
accggttacgatgccgtatgtatgcagccaaactctggcgcccaaggcgagtactctggc
ttgctggcaattcgtcgataccatcaatcccgtggtgaagcacaccgtaacgtgtgtctg
atcccgcagtctgcccacggcactaaccccgcatccgctcacatggcgggcatgcaggtg
gtagtggtggagtgtgacaagcagggtaacgtggacatggacgaccttcgtgccaaggcg
agtgatatggccgccaatctgtcctgcatcatgatcacttacccttcaacgcacggtgtg
tatgaagaaaccatccgcgatatctgccaagtgatccatcagcacggtggtcaggtgtat
ctcgacggtgccaacatgaacgcgcaggtgggcattacctcacccggatttatcggcgct
gacgtgtcacacctcaacctgcataaaacctttgctatcccgcacggcggtggcggccca
ggcatgggccctatcggtgtcaaagcacatctggcaccgttcgttgctggtcacagcgtg
gtaaaactgggtaaagcctgtgataacaatggcgcggttgcggcggcgcagtacggtagc
gctggcatcctgcccatcagttggatgtacatcaaactgctgggcgccaaaggactgcgg
ttatccactcagaatgccatgctcaacgctaactatctggcgaagaagctgtctgagcac
tatcccgtattgtaccgtggccgtaacgaccgcgtggcacacgaatgtatcatcgatttg
cgtccgctcaaggaagcttccggtgtcactgaaatggatattgctaagcgcttgaacgac
tacggtttccatgcgccaaccatgagcttcccagtcgcgggtacgctgatgattgagcca
actgaatctgaatcaaaagtggaactggatcgcttcatcgacgccatggtgtctatccgt
agcgaaatcgctaaagttgcagccggtgaatggccagcggacaataacccgctgcacaac
gcaccgcacaccatggctgacatcatggacccagcgtttgacgaacggccttacagtcgt
gaattggctgtgttcccatgcgatgccgtgcgtgccaacaagttctggccgaccgtgaat
cgtatcgatgacgtgtacggcgaccgcaacctgttctgtagctgtgtgccgatggaagac
tataagtag
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