Shewanella dokdonensis: KHX94_14460
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Entry
KHX94_14460 CDS
T07469
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00250
Alanine, aspartate and glutamate metabolism
sdk00310
Lysine degradation
sdk00350
Tyrosine metabolism
sdk00650
Butanoate metabolism
sdk00760
Nicotinate and nicotinamide metabolism
sdk01100
Metabolic pathways
sdk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KHX94_14460 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KHX94_14460 (gabD)
00310 Lysine degradation
KHX94_14460 (gabD)
00350 Tyrosine metabolism
KHX94_14460 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KHX94_14460 (gabD)
Enzymes [BR:
sdk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KHX94_14460 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KHX94_14460 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KHX94_14460 (gabD)
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Motif
Pfam:
Aldedh
NTP_transf_4
Motif
Other DBs
NCBI-ProteinID:
QVK22524
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Position
3010679..3012121
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AA seq
480 aa
AA seq
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MELQYPQLLRQQAYINGRWCDADNGQCQVVTNPANGEALAQVAVLGAAETQRAIDAAQAA
LPKWQALTAKARASILRRWFELIIQHTDDLALLMTSEQGKPLAEARGEVAYAASFIEWFA
EEAKRIYGDTIPGHLADKRLLVLKQAVGVTAAITPWNFPAAMITRKAAPALAAGCTMILK
PAPQTPLTALALAQLAEEAGIPAGVFSVVPGDAIAIGQVLCDSPIVRKLSFTGSTAVGKQ
LMAQCAPTLKKLSLELGGNAPFIVFDDADLDAAVDGAIIAKYRNAGQTCVCANRLYVHDK
VYQAFAEKLAAKVTALKVGAGINDGVVIGPLIDGKALEKVQSHLHDALDKGAKLLCGGQL
LAGNFMTPAVLTEVTSQMKVAREETFGPIAPLFRFHDEAEVIAMANDTEFGLAAYFYANN
LSRVWRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEEYLELKYLCISV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcaatatccccagttgttgcgacaacaggcttacattaatggccgttggtgt
gacgctgataatggtcaatgccaagttgtgacaaatccggctaacggtgaagccttagcc
caagtagcggtactcggggcggccgaaacccaacgcgcgattgatgccgctcaagccgcc
ttgcctaagtggcaggcgctgacagcgaaagcgcgtgctagcattttacggcgctggttt
gaattgattattcagcataccgacgatctcgcactgttgatgaccagcgaacagggtaaa
ccattagccgaagcgcgtggagaagtcgcttatgccgcgtcatttatcgagtggtttgcg
gaagaggctaagcgaatttatggtgataccattcctgggcatctcgccgataagcggctg
ttagtattaaagcaagccgttggggttaccgctgccattacgccgtggaatttcccggca
gcgatgatcactcgcaaagccgctccagcattagctgccggctgcaccatgatcctcaaa
cccgccccacaaacgccgttaacggcattagcgctggcacaactggctgaagaagcgggc
attccggcgggcgtattcagtgtggttcccggcgatgctatcgccatcggccaggtgtta
tgtgacagcccgatagtgcgtaagctgtcgtttaccggctctaccgccgtgggtaaacag
ttgatggcgcagtgcgctccaaccctgaaaaagctctcgctggagttgggcggaaatgct
ccgtttattgtgtttgatgatgcagatttggatgcggccgtagacggagccatcattgcc
aaataccgcaatgctggtcaaacctgcgtgtgtgctaatcgcctttatgttcacgacaag
gtttaccaggcgtttgctgaaaaacttgccgctaaagttaccgcgcttaaagtgggggcc
ggcattaatgatggcgtagttatcggcccgttgattgatggcaaagccttggaaaaagtg
cagtcgcacttgcatgatgcgctggataagggcgcaaaattgctgtgtggtgggcaactg
ttagccggcaatttcatgacgccagcagtgctgaccgaagttaccagccagatgaaagtt
gcccgcgaggagacctttggccccattgcgccgctatttcgtttccatgatgaagcggaa
gttatcgccatggcgaacgataccgaatttggtctggccgcatatttctatgccaataat
ttatctcgggtttggcgggttgctgaggcactggaatacgggatggtgggcattaacacc
ggtctgatttccaacgaagtagcaccttttggcggtataaaagcctctggactcgggcgc
gaaggttctaaatatggcatcgaagaatatctggaattgaaatacctgtgtatctcggta
taa
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