Shewanella dokdonensis: KHX94_14520
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Entry
KHX94_14520 CDS
T07469
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_14520
Transporters [BR:
sdk02000
]
Other transporters
Pores ion channels [TC:
1
]
KHX94_14520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
CarbopepD_reg_2
MetallophosN
Big_1
CooC_C
Dioxygenase_C
Motif
Other DBs
NCBI-ProteinID:
QVK22530
LinkDB
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Position
complement(3026748..3029024)
Genome browser
AA seq
758 aa
AA seq
DB search
MKLSALFVALASVGVSTTALAAQLQGKVTDNRGNPVANALVSVDGGNQVTTDAQGQYRLQ
IADNSHLHLHISSDKFKHSEQDLKISHGTITQDFTLSSSQIENIVVTASPLGRSALESTT
PVTVLSDDQLKLNTEPTLGDTLDKLPGVQASHFGAGASRPIIRGMDGPRVKILENGLSVG
DASTVSADHAVTAEAASAQQIEILRGPGTLLYGNGAIGGVVNVVDKRLHEQPVDSFNGEV
GARYDSANDGKTLNADLNGGNGQYNWHLDGTRRRTNSYDIPGNAIADDTTTHGTVDNSQL
QLDEYAAGVGYTGDNGFIGVSGARTESNYGIPGRGEEGAPDITIDLKKTAWQLHGGLLDP
FAGFSKVRLDAGYTDYQHAEEEDGDADTFFYNKQTEARLTLNNNPWGEWQGAMGLHFIHR
DFSVEGAEQLTPNSNTDTIAAFIMQERKVDDFRFELGGRIESYRLKPEAMTLDTLAGEEA
YQPQKLSDVNGTLSAGVVWDFDPSYNLSVALTRAERSATAEELYSYGPHDATQSFELGSE
FRVENGQIMVNAGDADKEIANNLDLTLRKIEGSWTGSLSMAYNRVNNFFYEGNTGLIASD
LVNSDEEGDLPVYQYAQADAELYSVEAQANIPFNDLWSLALFSDYTRGKLVDGGNLPRIS
PLRFGSTLNFDLDQWHADVGMIAYSRQSDVADNETETAGYTLVNASVTYRLFSDNGDMLV
YLKGSNLTDQQARPHTSLLKDYAPLMGRNLMLGVSYSF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttagcgctttatttgtagcactggcgtccgtcggtgtgagcactacggctttg
gccgcacaattacaggggaaagtaactgacaatcgaggcaatcctgtagcgaatgccttg
gtcagtgttgatggtggtaaccaagtgacaaccgatgcccaagggcaatatcgcttacag
atcgccgacaacagccatctgcatctgcatatcagcagtgacaagttcaaacacagtgaa
caggatctaaaaatcagtcacggcactattactcaggactttaccttgagcagtagccag
atagagaacattgtggtgaccgcctcacctttaggccgttctgcgctggaaagtacaacg
ccagttaccgtgcttagcgatgaccaactgaagctcaataccgaaccaacattaggcgat
acgctagataaactacccggggtgcaagcctctcactttggggctggcgccagtcgtcca
atcatccgcggtatggatggtccccgagtcaagatccttgaaaatggcttatctgtcggt
gacgcgtctacagtatcagcagatcatgcggtaactgccgaagccgcttctgcccaacag
attgaaattctgcgcggtccaggcacgctactctatggtaatggcgccatcggtggtgtg
gtcaacgtggtagataaacgcctgcacgaacaacctgtagatagcttcaacggtgaagta
ggcgcgcgttacgatagtgctaatgatggcaaaaccctaaatgccgatttgaatggcggt
aacggccagtataactggcaccttgatggcacccgccgccgcaccaattcttatgatatt
ccgggtaatgccattgccgatgacacaaccactcatggcacggtcgataacagccagcta
caactggatgaatatgccgctggtgtaggatataccggagataacggttttatcggtgta
tctggcgcccgcacagaatccaattacggcattcctggccgtggtgaagaaggcgcgccg
gatattacgattgacctaaagaaaaccgcttggcagttgcatggtggcctgttagatcct
tttgcgggtttctccaaagtgcgcctggatgctggatatactgattatcagcatgctgaa
gaggaagatggcgatgccgatactttcttctataacaagcagacagaagcccggctgacg
ctgaataataacccttggggtgaatggcaaggcgctatggggctgcacttcattcaccgt
gatttttcggtagagggcgctgaacagctaacccctaatagcaataccgataccattgca
gcgtttattatgcaggagcgcaaagtggatgatttccgctttgaactgggtgggcgcatt
gagagttatcgcctcaaacctgaggccatgacgctagatacgctggccggagaagaagcg
tatcaaccgcagaaactgagcgacgtgaatggcaccctatcagcaggtgtagtatgggac
ttcgacccgtcctacaacttgagtgtggcgttaactagagcagaacgctcagccaccgcc
gaagaactttacagctatggcccccacgatgcgacccagagctttgagctgggttctgaa
ttccgggtagaaaacggccagattatggtcaatgccggggatgctgataaagagattgcc
aataacctcgacctgaccttacgtaagatagaaggtagctggacgggctcattgagcatg
gcctataaccgcgttaataacttcttctacgagggtaatactggccttatcgcttctgac
ttggttaacagtgatgaagaaggcgatctaccggtttatcagtatgctcaagcagatgct
gagctttattcggtagaggctcaggccaatattccgttcaacgatctttggtcattggcg
ctgttcagtgattatactcgtggcaaattggtggatggtggcaatctgccgcggatctcg
ccactgcgcttcggctcaaccctgaatttcgatctggatcagtggcatgcggatgtcggc
atgatcgcctactctcggcagagcgatgtggctgacaatgaaacagaaaccgccggatac
accctcgtcaacgcttctgtcacctatcgtctgttcagtgataatggcgacatgctagtg
tatctgaaaggtagcaacctgaccgatcagcaagcgcgcccacacacctcattattgaaa
gattatgcgcctttgatgggacgtaatctgatgctaggcgtcagctattcattctaa
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