Shewanella dokdonensis: KHX94_14600
Help
Entry
KHX94_14600 CDS
T07469
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00550
Peptidoglycan biosynthesis
sdk01100
Metabolic pathways
sdk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KHX94_14600 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KHX94_14600 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdk01011
]
KHX94_14600 (mrdA)
Enzymes [BR:
sdk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KHX94_14600 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KHX94_14600 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
EFG_C
Motif
Other DBs
NCBI-ProteinID:
QVK22541
LinkDB
All DBs
Position
complement(3042839..3044704)
Genome browser
AA seq
621 aa
AA seq
DB search
MQQRKRITMHDHAAEAALFRRRAMFTFICVAILLLILVGNLYHLQITSYKDYATRSNDNR
IRVVPLPPSRGLIYDRHGKLLAENQPFYSLEVIPEKVKNMDAMLDELSKVVPLSDDERQS
FTDALKFHRRFKPLTLKSHLTEPELAAFSVNQYRFEGVSVEAGLNRYYPYGELLTHVLGY
VGRINNRDQKALELSGDWPDYAATNDIGKQGVEKFYESLLHGKPGHLEEEVNNLGRHIRT
LKVEAPEPGQDIYLTIDLALQQKAMELLAGRRGSIVAIDPRDGGILAMASSPSYDPNQFV
HGITAKAYSDLLNSRSRPLINRATQGQYAPASTVKPFLALMGLEDGIVNEKTRVWDPGFW
QIPGVERKYRDWKRWGHGWVDVYGAIINSCDTYFYDLAYKSGVDRISNFMTQFGFGENTG
VDIYEESAGNMPSRDWKRLRYNQPWYIGDTISVGIGQGYWTTTPLQLATAVTILANKGRR
LPPHLLKSIKDSTSMIDSPVEERPPLELKNPHHWEVIADAMRQTAHKSRFSDASYTAAMK
TGTGQVFSVAEDAKYDADTIDEHLRDNALIVAYAPFENPKIVLTVILENAGWGGQNAGPV
ARAMMDEYLLRDKWELTHAQP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaacgaaagcgaattaccatgcacgaccatgccgccgaggccgctttatttcgg
cgccgtgcaatgttcactttcatctgtgtggcaattctactgctgatcttggtaggtaac
ctttatcacctacagatcacctcatataaagactatgccacccgctctaacgacaaccgc
atccgagtggtaccactgccgcctagccgcgggttgatctatgatcgtcatggtaaactt
ctggcagaaaatcaaccgttttactcgttggaagtgatcccggaaaaagtcaaaaacatg
gacgccatgctggatgagctcagcaaggtggtgccattgtcagatgacgaacggcaaagt
tttactgatgcgctgaaatttcatcgccgctttaagccattaacactgaaaagccattta
actgagccagagttagccgcgttcagcgtcaatcaatatcgttttgaaggcgtatcggta
gaagcggggctgaaccgctattatccttatggtgagctgctgacccatgtactgggttac
gttggtcgcatcaataaccgcgatcaaaaggcattggagctttccggtgactggcccgac
tatgccgccaccaatgacatcggcaaacaaggcgtagaaaaattttatgagagcctgctg
cacggcaaacctgggcacctggaggaagaggtcaataacctagggcgccacatccgtacc
ctgaaagttgaagccccagaacccggccaggatatctacctcaccatcgacctggcatta
caacaaaaagcgatggaactgctggcgggacgacgcggctctatcgtcgccattgatcca
cgcgatggcgggattttggcaatggcctccagccccagctacgaccccaatcagtttgtc
catggtatcacggccaaagcctacagcgatttgctaaattcccgttcgcggccgttgatc
aaccgcgccacccaagggcaatatgcgccagcatcaacagttaaaccgttcctagccttg
atggggctggaagatggcatagtcaatgaaaagacccgagtatgggatccaggtttctgg
caaattcccggggtagaacgcaaatatcgtgactggaaacgttggggacacggttgggtc
gatgtctatggcgccattattaactcctgtgatacctatttttacgatctggcctacaag
agcggtgttgaccgcatctctaatttcatgacccagtttggttttggtgaaaacacgggt
gttgatatctatgaagaatcggccgggaatatgccctcccgcgattggaaacggctgcgc
tataaccagccgtggtatatcggcgacactatttccgtggggattggccagggttactgg
accacaacgccactccagttagccactgccgtcaccattctcgccaataaaggtcggcgt
ttaccgccgcatctgctgaaatccatcaaagacagcacatcgatgatcgattcgcccgta
gaagaacggccaccactagagctgaaaaatccccatcattgggaagtgattgccgatgcc
atgcgccagactgcacacaagagtcgtttcagcgatgccagttatactgctgcgatgaaa
acgggtacgggtcaggtattcagtgtggccgaagacgccaaatacgatgcggataccatc
gacgaacacctgcgggataacgccttgattgtggcctatgcgccatttgaaaatccgaaa
atcgtcctgacggtgattctcgaaaatgccggttggggtgggcagaatgcggggccggtc
gccagagcgatgatggatgaatatctgctgcgggataaatgggagttgactcatgcacag
ccataa
DBGET
integrated database retrieval system