KEGG   Shewanella dokdonensis: KHX94_14600
Entry
KHX94_14600       CDS       T07469                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
sdk  Shewanella dokdonensis
Pathway
sdk00550  Peptidoglycan biosynthesis
sdk01100  Metabolic pathways
sdk01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:sdk00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    KHX94_14600 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    KHX94_14600 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sdk01011]
    KHX94_14600 (mrdA)
Enzymes [BR:sdk01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     KHX94_14600 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:sdk01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   KHX94_14600 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer EFG_C
Other DBs
NCBI-ProteinID: QVK22541
LinkDB
Position
complement(3042839..3044704)
AA seq 621 aa
MQQRKRITMHDHAAEAALFRRRAMFTFICVAILLLILVGNLYHLQITSYKDYATRSNDNR
IRVVPLPPSRGLIYDRHGKLLAENQPFYSLEVIPEKVKNMDAMLDELSKVVPLSDDERQS
FTDALKFHRRFKPLTLKSHLTEPELAAFSVNQYRFEGVSVEAGLNRYYPYGELLTHVLGY
VGRINNRDQKALELSGDWPDYAATNDIGKQGVEKFYESLLHGKPGHLEEEVNNLGRHIRT
LKVEAPEPGQDIYLTIDLALQQKAMELLAGRRGSIVAIDPRDGGILAMASSPSYDPNQFV
HGITAKAYSDLLNSRSRPLINRATQGQYAPASTVKPFLALMGLEDGIVNEKTRVWDPGFW
QIPGVERKYRDWKRWGHGWVDVYGAIINSCDTYFYDLAYKSGVDRISNFMTQFGFGENTG
VDIYEESAGNMPSRDWKRLRYNQPWYIGDTISVGIGQGYWTTTPLQLATAVTILANKGRR
LPPHLLKSIKDSTSMIDSPVEERPPLELKNPHHWEVIADAMRQTAHKSRFSDASYTAAMK
TGTGQVFSVAEDAKYDADTIDEHLRDNALIVAYAPFENPKIVLTVILENAGWGGQNAGPV
ARAMMDEYLLRDKWELTHAQP
NT seq 1866 nt   +upstreamnt  +downstreamnt
gtgcagcaacgaaagcgaattaccatgcacgaccatgccgccgaggccgctttatttcgg
cgccgtgcaatgttcactttcatctgtgtggcaattctactgctgatcttggtaggtaac
ctttatcacctacagatcacctcatataaagactatgccacccgctctaacgacaaccgc
atccgagtggtaccactgccgcctagccgcgggttgatctatgatcgtcatggtaaactt
ctggcagaaaatcaaccgttttactcgttggaagtgatcccggaaaaagtcaaaaacatg
gacgccatgctggatgagctcagcaaggtggtgccattgtcagatgacgaacggcaaagt
tttactgatgcgctgaaatttcatcgccgctttaagccattaacactgaaaagccattta
actgagccagagttagccgcgttcagcgtcaatcaatatcgttttgaaggcgtatcggta
gaagcggggctgaaccgctattatccttatggtgagctgctgacccatgtactgggttac
gttggtcgcatcaataaccgcgatcaaaaggcattggagctttccggtgactggcccgac
tatgccgccaccaatgacatcggcaaacaaggcgtagaaaaattttatgagagcctgctg
cacggcaaacctgggcacctggaggaagaggtcaataacctagggcgccacatccgtacc
ctgaaagttgaagccccagaacccggccaggatatctacctcaccatcgacctggcatta
caacaaaaagcgatggaactgctggcgggacgacgcggctctatcgtcgccattgatcca
cgcgatggcgggattttggcaatggcctccagccccagctacgaccccaatcagtttgtc
catggtatcacggccaaagcctacagcgatttgctaaattcccgttcgcggccgttgatc
aaccgcgccacccaagggcaatatgcgccagcatcaacagttaaaccgttcctagccttg
atggggctggaagatggcatagtcaatgaaaagacccgagtatgggatccaggtttctgg
caaattcccggggtagaacgcaaatatcgtgactggaaacgttggggacacggttgggtc
gatgtctatggcgccattattaactcctgtgatacctatttttacgatctggcctacaag
agcggtgttgaccgcatctctaatttcatgacccagtttggttttggtgaaaacacgggt
gttgatatctatgaagaatcggccgggaatatgccctcccgcgattggaaacggctgcgc
tataaccagccgtggtatatcggcgacactatttccgtggggattggccagggttactgg
accacaacgccactccagttagccactgccgtcaccattctcgccaataaaggtcggcgt
ttaccgccgcatctgctgaaatccatcaaagacagcacatcgatgatcgattcgcccgta
gaagaacggccaccactagagctgaaaaatccccatcattgggaagtgattgccgatgcc
atgcgccagactgcacacaagagtcgtttcagcgatgccagttatactgctgcgatgaaa
acgggtacgggtcaggtattcagtgtggccgaagacgccaaatacgatgcggataccatc
gacgaacacctgcgggataacgccttgattgtggcctatgcgccatttgaaaatccgaaa
atcgtcctgacggtgattctcgaaaatgccggttggggtgggcagaatgcggggccggtc
gccagagcgatgatggatgaatatctgctgcgggataaatgggagttgactcatgcacag
ccataa

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