Shewanella dokdonensis: KHX94_15785
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Entry
KHX94_15785 CDS
T07469
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sdk
Shewanella dokdonensis
Pathway
sdk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KHX94_15785 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdk03400
]
KHX94_15785 (mutS)
DNA repair and recombination proteins [BR:
sdk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KHX94_15785 (mutS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Tricorn_C1
FCD
Motif
Other DBs
NCBI-ProteinID:
QVK24902
UniProt:
A0ABX8DJE4
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Position
complement(3279545..3282133)
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AA seq
862 aa
AA seq
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MQNTAASLDDDFEKHTPMMRQYLSMKAQHSDMLLFYRMGDFYELFYDDARRASELLGISL
TARGKSGGEPIPMAGIPYHAVETYLAKLVQQGESVAICEQIGDPALAKGPVERKVVRIVT
PGTLTDEALLQERQDNLLAAVYEGKNGFGYATLDVASGRFIITELEDLESLEAELQRTKP
AELLYSEDFSQLQLLNSIKGKRRRPEWEFDFDTAMRLLLDQFGTKDLHGFGIQQARLSLQ
AAGCLMQYVRDTQRTALPHINAIHQFNPSDSIVLDAATRRNLELTQSLSGGRENTLAAVL
DATATPMGSRMLQRWLHQPLRSRALIEARHQAVAELLTSGQHESLHQLLKSLGDVERIIA
RLAIRNARPRDLARLRQALELLPDIQQQLSTLQQRHLQQLSEQISEFPEELSLLQRAIVD
NPPVLIRDGGVIREGYNAELDEWRSLSDGASDYLQQLEVREKERTGIATLKVGFNRVHGY
YIEVSRGQSALVPLSYQRRQTLKNTERYIIPELKEYEEKVLSSQGKALALEKQLWDELFD
LLLPKLYALQCFAMAASELDVLSNFAERAESFNYCQPVLTDNTGIDIDEGRHPVVERVSQ
TPFIANPVVLNPNRRMLIVTGPNMGGKSTYMRQVALITLMAHIGSFVPASSATIGPIDRI
FTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGMSLAWAAAE
YLARKLGALTLFATHYFELTQLSELLPQVINVHLDAVEHADTIVFMHAVQEGAASKSYGL
QVAALAGVPAHVIKAAKMKLQELEARDSHSGNHTAAPVQSKLPFENETSEVELALQRLNL
DELTPKAALDLLYKLKALAKSN
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacacagctgccagcctagatgacgatttcgaaaaacatacgcccatgatgcgt
caatacctgtcgatgaaagcccagcatagcgatatgttgttgttttatcggatgggggat
ttttacgaactgttttatgacgatgcccgccgcgcttccgagttgctcggtatttcgcta
actgctcgcggaaagagcggtggcgagcccattcctatggctggcattccataccatgcg
gtagaaacctatctggccaaattggtacaacagggagaatcggttgccatctgtgagcag
attggcgatccggcattggctaagggcccggttgaacgcaaggtggtacgtatcgtcaca
ccagggacgttaaccgatgaagcgttattgcaagagcgacaggacaacctgctcgcagcg
gtttacgaaggcaaaaacggttttggttatgccacgctcgatgtagcttctggtcgcttt
attatcactgaactggaagatcttgagagccttgaagctgaactgcaacgaaccaaacct
gccgaactgctttacagtgaagatttttcccagctacaactgctaaatagcattaaaggt
aaacgtcgccgtcctgaatgggaatttgattttgatacggccatgcgcttattgctggat
cagttcggcactaaagatctgcatggttttgggattcaacaagctcgtttatcactgcag
gccgcgggctgtttaatgcagtatgtgcgcgacacacagcgcaccgcactaccacatatt
aatgcgattcatcagtttaatcccagtgacagcatagtactggatgccgccaccaggcgc
aatttggagctgacccaaagcctttccggtggccgggagaataccttagccgcagtgtta
gatgccacagcgacgccgatgggcagtcgcatgttacaacgctggctccatcagccgtta
cgcagccgcgctttgattgaagcgcgacatcaggcggtggctgaattactgacatcagga
caacacgagtcgctgcaccagttgcttaaatcattgggcgatgtagaacgaattattgcc
cgtttggcaatccgcaatgcccgcccacgggatctagcgcgtttacgtcaggcattggag
ctgttaccggacatccaacaacaattatcgacgctgcaacagcgtcatctacaacaactc
agtgaacagatcagtgagtttccagaggaattgtcgctgctgcaacgtgccattgtggat
aacccaccagtgcttatccgcgatggtggtgtcattcgtgaaggttacaacgcagaactc
gatgagtggcgcagcctgagcgatggcgcgtctgattacctgcaacaactggaagttcgt
gaaaaagaacgcaccggaattgccacgttgaaagtgggcttcaaccgggttcacggttat
tacattgaagtatcccgtggccagtctgcgctggtgccgctgagctaccaacgacggcag
accctcaagaataccgagcgttacatcattcccgagctgaaagagtacgaagaaaaagtg
ctctctagccagggaaaagccctcgcgctagaaaagcagttatgggacgagttattcgat
ctgctactgcctaaactgtacgcattacaatgctttgctatggctgcatcagaattggac
gtattaagcaactttgccgaacgagccgaatctttcaactactgccagccagtattaact
gacaatacgggcattgatattgatgaagggcggcatcccgttgttgaacgcgtgagtcaa
accccgtttattgccaacccagtggtgcttaaccctaaccgccgcatgttgattgtgact
ggccccaatatgggcggtaagtccacttacatgcggcaagtggctttgatcaccctgatg
gctcatattggcagttttgtcccagcatccagtgcgactatcggtccgattgaccgtatt
tttacccgtattggcgcttcggatgacctcgcatccggccgttccaccttcatggttgaa
atgacagaaactgcgaatattctgcacaatgcgaccgccaacagcttggtgttgatggat
gaaattggtcgtggcacgtcaacctacgacggcatgtcattggcctgggctgcggctgaa
tatctcgcccgtaaactgggggctctgacattattcgccacccattattttgagttgaca
caattatctgagttgttaccccaagtcatcaacgttcatctagatgcggtagagcatgcc
gacaccatagtgttcatgcacgcagtgcaggaaggcgccgccagcaagagctacggcttg
caggttgctgcccttgcaggggttccagcgcatgtgattaaagctgccaaaatgaaattg
caggaattggaagccagagatagccattcgggtaatcatactgctgcaccagtacagtca
aagctaccgtttgagaatgaaacttcagaagtggagctagcactacaacggcttaatctg
gatgagcttacacctaaagccgcactggatttgttatataaattaaaggcgttagctaaa
tctaactaa
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