Shewanella dokdonensis: KHX94_16320
Help
Entry
KHX94_16320 CDS
T07469
Name
(GenBank) GMC family oxidoreductase
KO
K06151
gluconate 2-dehydrogenase alpha chain [EC:
1.1.99.3
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00030
Pentose phosphate pathway
sdk01100
Metabolic pathways
sdk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
KHX94_16320
Enzymes [BR:
sdk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.3 gluconate 2-dehydrogenase (acceptor)
KHX94_16320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
QVK22774
LinkDB
All DBs
Position
3380521..3382293
Genome browser
AA seq
590 aa
AA seq
DB search
MSRQEQPVDVVLVGLGWTNAIMGMELAQEGLNVLALERGEDRDTVPDFAYPKMADELTYG
VRYKLMVKPAKSTITVRHSLAETAVPYRHLGSFLPGDGVGGAGTHWNGHTWRPMPEELRL
RSYVEQTFGKNIIPKDMTIQDYGVSYEELEPHFDFFDKVLGVSGKAGNINGKIQEGGNPF
EGPRSHEYPLPPLKRTLNDTMFSDAAKAQGLHPFPLPSSNASEAYTNPYGMQLGPCNFCG
FCERYGCINYSKASPQTAILGALKQHKNFAYRTGCEVIKVNLSDDKKTATGVTYIDAKGE
EVFQPAKLVVVGTFAYNNVRLLLLSGIGQPYDPLSNTGTVGRNYAYQMMGGATLFFKDKQ
FNPFIGAGSNATTVDDFAINQIDFAKEGFIGGSYLLAAQTNGQPIHSLPLPPGTPTWGAD
WKKAAKDYYGHAMSISSHGSNMSYRDCYLSLDPNYKDDHGLPLLRLTFDWKENDLRMTQF
MKQKVAALAKGLNPDFLKVSFKDIGTHYDVRPYQTTHNVGGAIMGTDPKTSVLNRYQQSW
DVHNVFVLGSSSFPQNLQYNPTMLVGALAYWSAKAIREQYLKHPGPLVQA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcaagaacaaccagtagatgtagtgttagtagggttgggctggaccaacgcc
attatgggcatggaattggctcaagaaggtttgaatgtgctggcgcttgaacgcggtgaa
gatcgcgataccgtacccgatttcgcctacccgaaaatggcggatgagttaacttacggg
gttcgttacaaactgatggtgaaacccgccaaaagtaccattacggtgcgccatagtttg
gcagaaaccgccgttccctatcggcatttaggctcttttctgcctggcgatggcgttggt
ggtgcgggcacgcactggaacggtcatacctggcgcccaatgccagaagaactgcgtttg
cgtagctatgttgaacaaacctttggtaaaaatattattccgaaggacatgactattcag
gattatggtgtcagctatgaagagctggagcctcactttgatttctttgacaaagtgcta
ggggtttctggtaaagccggcaatatcaatggcaaaatccaggaaggcggtaatccgttt
gaaggtccgcggagccatgaatatccgttgccgccactgaaacgtacgctaaacgatacc
atgttttctgacgccgctaaggcgcaaggactgcatcctttcccgttgccatcatccaac
gcgtcagaagcttataccaatccttacggaatgcagttaggcccttgtaacttctgtggt
ttctgtgaaagatatggttgtattaactactctaaagcctccccgcaaaccgctattctg
ggagcgttgaagcaacataagaacttcgcctaccgaaccggatgtgaagtcatcaaagtc
aatctgagtgatgataaaaagactgccaccggggtgacttatatcgatgctaagggcgaa
gaagtttttcaacctgccaaattagtcgttgttggcacatttgcttataacaacgttcgt
ttactgttgttatctggcatcggccagccttacgatccgctctccaacactggtaccgtg
gggcgcaactacgcctatcagatgatgggtggcgctactttattctttaaagataagcag
tttaaccctttcatcggcgctggcagtaatgcgaccaccgttgatgacttcgccatcaac
cagattgattttgctaaagaaggctttattggtggctcctatttgttagcggctcaaacc
aatggtcagcctattcacagcctgccgttacctccaggaacgccaacttggggcgctgac
tggaaaaaagcggcgaaagattattatggtcatgccatgagcatcagttctcatggctcc
aatatgtcttaccgcgattgttatttgagtttggatcctaactacaaagatgatcatggt
ttgccgttgctgcgtttaacctttgactggaaagaaaatgatctgcgcatgacccagttt
atgaaacagaaagtggctgcgttagcgaagggactgaatccagattttctgaaggtgtca
tttaaagatatcgggactcactacgatgtgcgtccatatcagaccactcataatgtaggc
ggtgcgattatgggcactgatcctaagaccagtgtgctcaatcgttatcagcaaagctgg
gacgtccataacgtctttgttttgggttcaagctcattcccgcagaacctacagtacaac
cccaccatgttagttggtgccttggcatactggtcagctaaagcgatccgtgagcagtat
ctgaaacacccaggtccattggtgcaagcataa
DBGET
integrated database retrieval system
