Shewanella dokdonensis: KHX94_16380
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Entry
KHX94_16380 CDS
T07469
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KHX94_16380 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdk01007
]
KHX94_16380 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdk03016
]
KHX94_16380 (hisS)
Enzymes [BR:
sdk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
KHX94_16380 (hisS)
Amino acid related enzymes [BR:
sdk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KHX94_16380 (hisS)
Transfer RNA biogenesis [BR:
sdk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KHX94_16380 (hisS)
Prokaryotic type
KHX94_16380 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
Motif
Other DBs
NCBI-ProteinID:
QVK22784
LinkDB
All DBs
Position
3393996..3395276
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AA seq
426 aa
AA seq
DB search
MAKQIQAIRGMNDILPDQSPVWQKVEAVLRASVASFGYSEIRTPIVENTDLFKRSIGEVT
DIVEKEMYTFADRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYIGPMFRHERPQKG
RYRQFHQFGVEVYGIASAEIDAEVLMLSASLWDKLGMREHVTLELNTLGDNQERIAYRDA
LVAFLEQHKEVLDEDSQRRMYSNPLRVLDSKDPEVQALLADAPVLMDYLGEDSKAHFSRL
CELLQAVGIQYRVNPRLVRGLDYYNRTVFEWVTDSLGAQGTVLAGGRYDGLVGQLGGKDT
PAVGFAMGLERIVLLLETLGLTADVPSAVDVYVTATSDDCVAEAVKVAQELRQTVPTLRV
MSHCGGGNFKKQIKRADKSGATYALIIGETELADNKVAVKPLRDDSEQLLIERSALAAYL
AEQLKK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacagatccaagcgattcgcggcatgaatgatattctgcccgaccagagtccc
gtgtggcaaaaagtcgaggcggtgttacgcgcctcagtagcgtcattcggttacagtgaa
atccgtactcccatcgtggaaaataccgatctctttaagcgctctatcggcgaagtcacc
gacattgttgaaaaagagatgtataccttcgccgatcgtaacggtgacagtctgactctg
cggccagaagggaccgcttcgactgtgcgcgccggtaacgagcatggtttgctgtacaat
caggaacagcgactttggtacattggcccaatgttccggcatgagcgtccacagaaaggg
cgttatcggcagttccaccagtttggtgttgaagtttacggcatcgccagcgccgagatt
gacgctgaagtgttgatgctgtcagcatcgctgtgggacaagctgggcatgcgcgagcat
gtaacgctggaattgaacacccttggtgacaatcaggaacgcattgcttaccgtgacgcg
ctggtggcatttctggaacagcataaagaggtgttggacgaagacagccagcgccgtatg
tacagtaatccgttgagggtactggacagcaaagatcctgaagtgcaagcactattggct
gatgcgccagtgctgatggactatctcggtgaagattccaaagcacatttttcacgctta
tgtgaactactgcaagccgttggtatccaatacagggttaatccgcggttggtgcgtggt
ctcgactactacaatcgcaccgtgtttgaatgggtgaccgatagtctaggcgcgcagggc
acggttctggccggtggtcgttatgatggtttagttgggcagctaggcggtaaagatacc
ccagccgtcggttttgccatgggacttgagcgtattgtcttgttgctggaaaccctaggg
ctcacagccgatgtgccatcagccgtggatgtttatgtcacggcaaccagtgatgactgt
gttgcagaggcggtcaaggtggcacaagaactgcgccagacagtgcctacgctccgggtg
atgagccattgcggcggcggtaactttaaaaaacagattaaacgggctgataagagcggc
gcaacttatgcgttgattattggcgaaacagaattggcagataataaggtagcagtcaaa
cctttgcgtgacgacagtgaacaactgctgattgaacgcagtgcattggctgcctatctg
gcggaacaactcaaaaaataa
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