Shewanella dokdonensis: KHX94_16435
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Entry
KHX94_16435 CDS
T07469
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00190
Oxidative phosphorylation
sdk01100
Metabolic pathways
sdk02020
Two-component system
Module
sdk_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
KHX94_16435 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KHX94_16435 (cydB)
Enzymes [BR:
sdk01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
KHX94_16435 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
DUF2649
Motif
Other DBs
NCBI-ProteinID:
QVK22791
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Position
3412497..3413657
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AA seq
386 aa
AA seq
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MFDYEILRFIWWALVGVLLIGFAVTDGFDMGVGALLPFVGKDDTDRRVMINTVAPHWDGN
QVWLITAGGALFASWPTVYAVSFSGFYVAMILVLAALWLRPVGFDYRSKIEDPKWRKTWD
WCLFIGGFIPPLVIGVAFGNLLQGVPFHFDEYLRPYYGTSDSNWILNLLYLLNPYGLLAG
LISAAMFMNQGACWLQMKTEGELRNRVAGAAQILSLAILVLFAIAGVWLAYGIDGYVIKS
ALDTHAASDPTNKQVAVEAGAWLANYSKYPLTVIFPVLGLVSPLLVVVTSRMGRSGFAFL
FSSLTIAGVILTCGVSMFPFVMPSSLDPSVSLTMWDATASHLTLTVMTWVAIIFVPTVLG
YTLYTYYKMYGRIGRQHIESNSTSLY
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattacgaaatattgagatttatctggtgggcactggtaggtgttctgctgatt
ggtttcgcggtaacagacggttttgacatgggggttggtgccttattgccatttgttggc
aaagacgacactgatcgccgtgtgatgatcaataccgtggctccacactgggatggtaac
caggtatggcttatcactgccggtggggcactgtttgcttcctggccaaccgtatatgcg
gtttccttctcaggattctacgtggcgatgattttggtgttggcggcgttgtggctgcgt
ccggtagggtttgactatcgttccaagattgaggatccaaagtggcgtaaaacctgggat
tggtgcttgtttatcggtggttttattccgccactggtcatcggtgtggctttcggtaac
ttactgcaaggtgtgcctttccacttcgacgaatacctgcgtccttactatggaacaagt
gacagtaactggatcctcaacctgctgtatctgttaaatccttatggtttgctggcggga
ttaatcagtgctgccatgttcatgaatcagggcgcttgctggttacagatgaagactgaa
ggtgaactgcgtaaccgtgtggctggcgcagcgcagatcctgtcattggctattctggtg
ctgtttgccattgccggtgtatggttggcttatggtattgatggctatgtcatcaagtct
gcactggatacccacgcggcttctgaccctaccaataaacaggttgcggttgaggctggt
gcttggttggcaaactacagcaagtacccattaactgtgatattccctgttctgggcctg
gtgtcgccgctgctggtagttgttaccagtcgtatggggcgttcagggttcgcgttcctg
tttagttcattgactattgcgggtgtgatcctgacttgtggtgtgtctatgttcccattt
gtgatgccttcttcactggatccgagtgtgagcctgacaatgtgggatgctactgctagt
cacctgactctgactgtgatgacttgggttgcgatcatctttgtgccaacggtactggga
tacactctgtacacatactacaaaatgtatggacgtatcggtcgccagcatattgaatcc
aacagtacttcactttactaa
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