Shewanella dokdonensis: KHX94_16915
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Entry
KHX94_16915 CDS
T07469
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
sdk
Shewanella dokdonensis
Pathway
sdk01503
Cationic antimicrobial peptide (CAMP) resistance
sdk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KHX94_16915
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
KHX94_16915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_16915
Transporters [BR:
sdk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
KHX94_16915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_29
NACHT
AAA_16
nSTAND3
SMC_N
RsgA_GTPase
AAA_5
Mg_chelatase
DUF87
NB-ARC
AAA_18
AAA_23
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QVK22853
LinkDB
All DBs
Position
complement(3516059..3517294)
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AA seq
411 aa
AA seq
DB search
MPLLDIRNLTIELSTPHGPVRALEKVSITVNAGEVHGLIGESGSGRSMLARAILGLYEPN
WTLTADRMMWDGQNLMDMSRQQRRSLMGEDISMIFQDPSGSFDPAFTVGQQLIEAIPPNH
KLAFWRRPQERIYLAQKWLHKVGIKHPRKVLSSYSWELSEGECQKVMIAMALAKQPRLLI
ADEPTASMEPSTQAQIYRLLTQLNQLQNVTILLISHELDTLSNWCNRMTVLYCGQVMESG
PTADLLEQPNHPYTKALLDNMPDYTNPKIHKILMPTLPGSVPALQHLPIGCRLGPRCPEA
RRKCVTQPLLSHYKDRYFACHFPYQSEPIEDDPLLKVKDLSKTYFTGYRGFKRQYAEVLK
PVSFELYAGETLAIVGEAGSGKSTLARILVGAEYRSGGEIFYQGQEWDKKY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccgttacttgatatccgcaacctcaccattgaactgagcactccgcatggcccagtc
agagccctggagaaagtcagtattaccgttaatgccggtgaagtgcatggtttgatcggt
gagtctggctctggtcgcagcatgctggcacgagctattttgggactttatgaaccaaac
tggactctcaccgctgaccgtatgatgtgggatggtcagaacctgatggatatgagtcgc
cagcagcggcgcagcctgatgggtgaagatatctcaatgatttttcaggatccatctgga
agctttgacccagcattcaccgtaggtcagcaactgatagaggcgattccgcccaatcac
aagctggccttctggcgacggccacaggaacgcatatacctggcccaaaaatggctgcat
aaggtagggatcaaacatccacgtaaagtgctgtcgagctactcctgggagttatcagaa
ggagaatgtcagaaagtgatgatcgccatggcgctggcaaaacagcccagattgctgatt
gctgacgaaccgacggcgtcgatggaacccagtacccaggcacagatctatcgactgctg
acccagctcaaccaattgcagaatgtcaccattttattgataagccacgagctggatacc
ttgtccaactggtgtaaccgcatgacagtgctgtactgtggacaggtaatggaatcgggg
ccgaccgctgatttactggaacagcctaaccacccttataccaaagcattgctggataac
atgccggattataccaatccgaaaatccataagattttgatgcccaccttgcccggttct
gtaccagcattgcagcatctgcctatcggctgccgactggggccacgctgtccagaagct
cgccgaaaatgtgtgacacaaccgctgctgtctcattacaaagaccggtattttgcctgt
catttcccgtaccagagtgagccgatagaagatgaccccttgcttaaagtcaaagacctc
agcaaaacctattttacgggttatcgcggctttaaacgccagtatgctgaagtgcttaaa
cctgtgtcctttgaactctatgctggcgaaacgctggcgattgttggtgaagcgggttcc
ggcaaaagtaccctggcaagaatattggttggggcggaatatcgcagcggcggcgaaatt
ttttatcaagggcaggaatgggataaaaaatattaa
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