Shewanella dokdonensis: KHX94_17025
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Entry
KHX94_17025 CDS
T07469
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
KHX94_17025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_Tnp_1
rve_3
HTH_28
HTH_23
rve_2
HTH_29
HTH_21
Phage_CI_repr
HTH_3
GP3_package
DDE_Tnp_IS240
ABC_tran_CTD
LZ_Tnp_IS481
Motif
Other DBs
NCBI-ProteinID:
QVK24922
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Position
complement(join(3539272..3540212,3540212..3540428))
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AA seq
385 aa
AA seq
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METAQLVVDQGYTNREAAEAMGVGYSTLGKWVKQLREERAGKTPQASPMTPEQREIRELK
KKIERLELEKDIFKKGFCSVDVGLHETLSLIEKLSQSNKHRYSVNHLCAVLDVHRSTFKY
WQQRDKRPSPEAIRLRSLVREAYRQSGGSAGARTLSDIITNDESHDITLSRYRAGKLMKA
LSLFSCQLPKHTYRKATQEHVAIPNLLDRQFAVTAPDQVWCGDVSFIWTGNRWAYLAVVL
DLFARKPIGWAMSYSPDSNLTSQALTMAFEYRGQPKNVMFHSDQGCHYTSRKFRQLIWRY
RLTQSMSRRGNCWDNSPMERFFKSLKTEWVPTTGYVSFTEAKQKIGEYIHGYYSRLRPHS
YNGGLTPNESEKRYWNSYNDVAKKT
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ctggaaacagcacaactggtagttgaccaaggttatacgaatagagaagccgctgaagcg
atgggcgttggctattcaacgctgggtaaatgggttaaacaattgcgagaagagcgtgcg
gggaaaacacctcaggcctcacctatgacgcctgagcaacgcgaaattcgtgaactgaaa
aagaaaattgaacgccttgaattagaaaaggatatttttaaaaaaggcttctgctctgtt
gatgtcggactccatgaaacactctcgttaatcgagaagctgagccagagcaataagcac
cgttattcggttaatcatctgtgtgcggtactggatgtccaccgtagcacgtttaaatac
tggcagcagcgcgataagcgaccatcgccggaagctatccggctgcgtagcttagtacgt
gaagcgtatcgacagagtggcggttctgccggggccagaaccctctcagacattatcacg
aacgatgagtctcacgacattacgctgagccgataccgtgcaggaaaattgatgaaagcg
ctgagtttattcagctgtcagttgccaaaacatacttacaggaaagctactcaggagcac
gttgctattccaaacttactcgacagacagttcgccgttacagcgccggatcaggtctgg
tgtggtgatgtcagtttcatctggacgggcaaccgctgggcttatctggctgtggtactc
gatctgtttgcccgcaagccaataggctgggcaatgagttattcaccggacagtaatctg
accagtcaagctctgacaatggcgttcgagtatcgcgggcagccaaagaacgtgatgttc
catagcgaccagggatgtcactatacaagccgcaaattccgtcagttaatctggcgctac
cgcttaacgcaaagcatgagtcgcagaggaaattgttgggacaatagcccaatggaacgc
ttcttcaaaagccttaaaaccgaatgggttccaacgacaggttacgtgagctttacggaa
gcaaagcagaagattggtgaatatattcatggctattacagtcgactgagaccgcattcg
tacaatggtggtttaacgccaaatgaatcggagaaacgttactggaatagctacaacgat
gtggccaaaaagacttga
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