Shewanella dokdonensis: KHX94_17275
Help
Entry
KHX94_17275 CDS
T07469
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00020
Citrate cycle (TCA cycle)
sdk00480
Glutathione metabolism
sdk00720
Other carbon fixation pathways
sdk01100
Metabolic pathways
sdk01110
Biosynthesis of secondary metabolites
sdk01120
Microbial metabolism in diverse environments
sdk01200
Carbon metabolism
sdk01210
2-Oxocarboxylic acid metabolism
sdk01230
Biosynthesis of amino acids
sdk04146
Peroxisome
Module
sdk_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KHX94_17275
09102 Energy metabolism
00720 Other carbon fixation pathways
KHX94_17275
09106 Metabolism of other amino acids
00480 Glutathione metabolism
KHX94_17275
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KHX94_17275
Enzymes [BR:
sdk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
KHX94_17275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
PDZ_CPAF_rel
Motif
Other DBs
NCBI-ProteinID:
QVK22902
LinkDB
All DBs
Position
3595878..3598103
Genome browser
AA seq
741 aa
AA seq
DB search
MTDKTPTIIYTETDEAPALATLSLLPIIQRFTKIAGINVETRDISLSGRMIAAFPERLTA
AQQIADHLAELGQLATTPDANIIKLPNISASIPQLKACIKELQAKGYALPDYPEEPATAE
EKEIKSRYDKIKGSAVNPVLREGNSDRRAPASVKQYARKHPHSMGAWSQDSKSHVAHMYH
GDFYGSERSVTMPAADTVSIVLEQNDGQKVTLKQSLKLLAGEIIDASVMNVRELSAFYEK
EIAAAKSEGVLLSLHLKATMMKVSDPVLFGYAVKAYYKALFAKYADTFKVIGVDVNNGFG
DVVARIAELPSTEKAAIEADIAAIYAAQPPLAMVNSDKGITNLHVPSDVIIDASMPAAIR
AGGKMWGPDGQLHDIKAMIPDRCYAGVYDEAINFCKEHGAFDPATMGTVPNVGLMAQKAE
EYGSHDKTFEISAAGVVKVYNAAGDVLLAHEVEQGDIWRMCQAKDAPIRDWVKLAVRRAR
LSNTPAVFWLDENRAHDAQVIAKVKAYLPEEDTRGLDIQILEPKAAARLSLTRMKAGQDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFVEENH
LRWDSLGEFLALGASLEHLSQTTGNAKAQVLANCLDQAIGEFLDCNKSPSRKVGEIDNRG
SHYFLAQYWAKALAAQDKDAALQQYFAPLAAALVAKETQIVTELNSVQGVAVAMDGYYRP
DHQLASAAMRPSATLNALMDA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaactcccaccatcatctatacggaaacagatgaagcgcctgcgttggcg
accctgtcactgctacctattattcagcgctttaccaaaattgccgggattaatgttgaa
acccgtgatatttcgctgtctggtcgaatgattgcggctttccccgaacggctgaccgca
gcacagcaaattgctgatcatcttgcagaactaggacaactggcgaccactccagacgcc
aatatcatcaagttgcctaacatcagcgcttcaattccacagttaaaagcctgcatcaaa
gaacttcaggcaaagggctacgcgctgccagattacccagaggagccagcaactgctgaa
gaaaaagagattaaatctcgttacgacaaaattaaaggcagtgccgtaaatccggtgctg
cgtgaaggtaactctgaccgccgtgcgcccgcatctgtgaagcaatatgcgcgtaaacat
ccacattctatgggcgcctggagtcaggattccaagtcgcacgtagcacacatgtatcat
ggtgatttctatggcagcgaaagatctgtcactatgccagctgccgataccgtctctatt
gtgctggaacagaacgatggacaaaaagttacgctaaaacagagtcttaagctgttggcg
ggagaaattattgatgcttcggtaatgaatgtccgcgaactcagcgccttttatgagaaa
gagattgctgctgccaagtcagaaggggtgttgctgtcactgcatctgaaagccaccatg
atgaaggtgtctgatcctgtgctgtttggttatgccgttaaagcctattacaaggcactg
tttgccaaatatgctgacacttttaaagtgattggggttgacgttaataatggttttggc
gatgtggttgcccgcattgctgaattgccatcaaccgagaaagccgccattgaagcagat
atcgcggcgatttatgcggctcagccaccactggctatggtgaactccgacaagggcatc
actaacctgcatgtcccaagtgatgtcattatcgatgcttctatgcctgcggctatccgc
gcaggaggcaagatgtgggggccagatggtcagttacatgatatcaaggcgatgatccct
gaccgttgctatgcgggtgtctatgacgaagcgattaacttctgtaaagaacatggtgca
tttgacccggccacaatgggcactgtgcctaatgtgggcttgatggcgcagaaagccgaa
gagtacggcagccatgataagacgttcgaaatctcagccgccggggtggtgaaagtttac
aacgctgctggtgacgtgttgttggctcacgaagtggaacaaggggatatctggcgcatg
tgtcaggccaaagatgcgcctatccgagactgggtcaaactggcggtgcgccgcgctcgc
ttatcaaatactccagcggtattttggttggacgaaaatcgcgcccatgatgcgcaggtt
atcgctaaggtcaaagcttatctgcctgaagaagatacccgtggtctggatatccagatc
ctggaacctaaggcggccgcgcgcttgtcgttaacccgcatgaaagctggccaagacacc
atttctgtcactggtaatgtcctgcgtgattatctcacagacttattcccgattctggaa
ttgggcaccagtgccaagatgctatctattgtgccattgatgaatggtggtggtctgttt
gaaaccggtgctggtggtagcgcccccaaacatgtgcagcagtttgtggaagaaaaccat
ctgcgttgggattctttaggtgaattcttggccttaggtgcctcgctggaacatttgagt
cagaccacaggcaatgccaaagcacaggtgttagcgaattgtctggatcaggcgattggt
gaattccttgactgtaataaatcgccttcgcgtaaagtgggggaaattgataaccgtggc
agccattatttcttggcgcaatactgggctaaggcgttagctgcgcaagacaaagatgct
gcactgcaacaatattttgcaccattggctgctgccctggtcgccaaggaaacacagatt
gtgactgagttaaatagtgtgcagggtgttgccgttgctatggatggttactatcggcct
gatcatcagttagcctctgccgcaatgcgcccgagtgccacgctgaatgctttgatggac
gcttaa
DBGET
integrated database retrieval system
