Shewanella dokdonensis: KHX94_17525
Help
Entry
KHX94_17525 CDS
T07469
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00860
Porphyrin metabolism
sdk01100
Metabolic pathways
sdk01110
Biosynthesis of secondary metabolites
sdk01120
Microbial metabolism in diverse environments
sdk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KHX94_17525 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdk04147
]
KHX94_17525 (hemB)
Enzymes [BR:
sdk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
KHX94_17525 (hemB)
Exosome [BR:
sdk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
KHX94_17525 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QVK22940
UniProt:
A0ABX8DEX7
LinkDB
All DBs
Position
complement(3651959..3652984)
Genome browser
AA seq
341 aa
AA seq
DB search
MSDQCNHTHTFKAPLRRLRRLRTSEAMRAMVRENFISLDDLIHPIFIEEGITAPVEIRTL
PGISRFPESMLAQEIKELQKLGVKYVMPFGISHHKDAIGSDTWNDEGLLARMVRTIKQTA
PEMIVIPDICFCEYTDHGHCGVIEHIHDDVHVCNDATVENLVKQAICAAKAGADMLAPSA
MMDGQIRAMRDGLDAAGYENVSILAHSAKFASAFYGPFREAVASELKGNRKGYQLDCADG
RQAMVEALLDEEEGADILMVKPGTPYLDVLARLRDRTDLPLAAYHVGGEYASIKFAALAG
ALDERAVVTESFIGFKRAGASLIVSYYTKQFAEWLAADKNA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcaatgtaatcacactcatacctttaaagcgccgctgcgtcgtctgcgccgt
ttgcgtacttcagaagctatgcgtgctatggtccgggaaaactttatctcgctggacgat
ctgatccacccgatttttattgaagaaggcattactgccccggttgaaatccgcactctg
ccaggcatcagccgttttccagagtccatgttggcgcaggaaatcaaagagctgcaaaaa
cttggcgttaagtatgtgatgccttttgggatctcccatcacaaagatgctatcggcagc
gatacctggaacgatgaaggtttgctggcgcgcatggtgcgcaccattaagcaaaccgcg
ccggaaatgatcgtcatcccagatatttgtttctgtgaatacacagatcatggtcattgt
ggcgtgattgaacacatccatgatgatgtgcatgtatgtaacgatgccactgtggaaaat
ctggtaaaacaggcgatctgcgccgctaaagctggggccgacatgctggcgccctctgcc
atgatggatggccagatccgcgctatgcgtgatggtttagatgccgcgggttatgaaaac
gtgtctatcctcgcccactcagctaaattcgcttccgcattttatggcccattccgggaa
gcggtggccagcgaactgaaaggtaaccgtaaaggttatcaactagattgcgctgatggc
cgccaagccatggtggaagcgctgttggacgaagaagaaggtgccgatatcctgatggta
aaaccgggcacaccttatctggacgtattagcgcgtctgcgtgaccgcactgatctgccg
ttggcggcttatcatgtgggtggcgaatatgccagtatcaagtttgccgcactggctggg
gcgctggatgaacgcgccgtggtgactgaaagctttattggcttcaaacgtgcgggggct
agcctgattgtgagctactacactaaacaatttgctgaatggctggcagctgacaaaaac
gcttaa
DBGET
integrated database retrieval system
