Shewanella dokdonensis: KHX94_18215
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Entry
KHX94_18215 CDS
T07469
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sdk
Shewanella dokdonensis
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdk03032
]
KHX94_18215 (gyrA)
03400 DNA repair and recombination proteins [BR:
sdk03400
]
KHX94_18215 (gyrA)
Enzymes [BR:
sdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KHX94_18215 (gyrA)
DNA replication proteins [BR:
sdk03032
]
Prokaryotic type
DNA Topoisomerases
KHX94_18215 (gyrA)
DNA repair and recombination proteins [BR:
sdk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KHX94_18215 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QVK23028
LinkDB
All DBs
Position
3796366..3799068
Genome browser
AA seq
900 aa
AA seq
DB search
MTDQASSISPINIEDELRTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDAAAAM
RYTEIRMQRLAHHLLADLDKETVDFVPNYDGTEQIPEVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLALIENPDLSIDELINCIPGPDFPTAAIINGRKGIEEAYRTGRGKV
IMRARADFETEDNGRERIVVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALANGQPKLFNIKEMLEAFILHRREV
VTRRTVFELRKARERAHILEALAVALANIDPIIELIKNSPSPSEAKQRLTEQGWALGNVQ
AMLEKAGDDAARPEWLEPQFGIHEGLYFLTETQAQAILDLRLQKLTGLEHEKILQEYEEL
LETIAGLLHILHSSVRLMEVIKEELQEVLTQFGDARRTEINESAADLSLEDLINEEDVVV
TLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEQLLIANTHDTILCFSDFGKLYW
LKVYQLPLASRQSRGRPIVNLLPLEGEERITAILPVREYEEGKYIIMATSNGTVKKTALT
EYSRPRSNGIIAVNLKDGDQLIGVDITDGSSEIMLFSDAGKVVRFKEAEESPITDEDGNP
VLDENGEVQITFKGVRPMGRTATGVRGIALEDGQKVVSLIVPRGDDAILTVTANGFGKRT
ALDEYPAKSRATKGVVSIKVSDRNGAVVGAVQAAENDEIMLISDKGTLVRTPVSGVSLIG
RNTQGVTIIRTADDETVVGLQRIDEIQAEDDDILDDAEVDMLTDAPDNEGDIAADEDTAE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaggcttcatccatttcgccaatcaatattgaagacgaactaagaacttcc
tacctcgactacgccatgagcgtaattgttggccgggccttgccagatgttcgtgacggt
ttgaaaccagttcatcgccgtgtactgtttgcgatgaacgagctgaaaaacgactggaac
aaaccttataaaaagtccgcccgtgtcgttggtgacgttatcggtaagtatcaccctcat
ggcgatagtgcggtatacgataccatagtgcgtatggcgcaaccattttcattgcgttat
accttggttgacgggcaggggaacttcggttccgtggacggcgatgccgcagccgctatg
cgttataccgaaattcgcatgcagcgcttggcccatcacctgctggccgacctcgataaa
gaaaccgtggattttgtacctaactatgatggtactgaacagatccccgaagtgttaccg
acccggatccctaacctgctggtcaacggttcttccggtattgcggtggggatggcgacc
aacattccaccacacaatctgacggaagtggtcaatggttgtttggcgttgattgaaaac
ccagacctttccattgatgagctgatcaactgcattcctgggcctgacttcccgactgct
gcaattatcaatggccgcaaaggtattgaggaagcttatcgtaccggtcgtggcaaagtg
atcatgcgtgcccgcgctgactttgaaaccgaagataacggtcgtgaacgcatcgtagtg
accgaaatcccttatcaggtgaataaagctcgcctgattgaaaagattgctgagttggtt
aaagacaaaaaaatcgaagggatcagcggcttacgtgatgagtccgataaggacggcatg
cggattgttatcgaaatcaaacgcggtgaagtcggggaagtggtactgaataatctgtac
gcacagacccagatgcagtgttctttcggtatcaatatggtggcgttggcaaatggccaa
ccaaagctgttcaacatcaaggagatgctagaagcctttatcctgcatcgccgcgaagtg
gttacccgccgtaccgtatttgaattgcgtaaagcccgcgaacgggcgcacatcctggaa
gcattagccgttgccttggctaatatcgatccgattattgagctgatcaagaattctcca
agcccgagcgaagctaaacaacgtctgacggaacagggctgggccttgggcaatgtgcag
gccatgctggaaaaagccggtgatgatgccgcacggccggaatggttggagccgcagttt
ggtatccatgaggggctatatttcctgaccgagacacaagctcaggcaattttggatctg
cgtttgcagaaactgaccggcttggaacacgaaaaaatcctgcaggaatatgaagaactg
ctggaaaccatcgctggtttattacatatcctgcacagctcagtgcgtttgatggaagtg
atcaaggaagagctgcaagaagtgttgacccaattcggcgatgctcgccgtaccgaaatc
aatgagtccgccgcagatctcagcctggaagatttgatcaacgaagaagatgtcgtggtg
accttgtcacatctaggttatgccaagtatcaaccgctaaccgactatcaggcgcagcgc
cgtggcggtaaaggtaaagcggcaaccaaggtaaaagatgaagacttcgttgagcagttg
ctgattgccaatactcacgacaccattttgtgcttctcagactttggcaaactgtattgg
ttaaaagtatatcagttgccattggcgagccgtcagtcgcgtggtcgtccaattgtgaat
ctgttaccgctagaaggtgaagagcgcatcaccgctattttgccggtaagagaatacgaa
gaaggcaagtatatcatcatggcaacctccaatggtaccgtgaagaaaaccgccctgact
gaatacagccgtccacggagtaatggcattattgcggtgaacctgaaagacggtgaccag
ttgataggcgtggatatcaccgatggtagcagtgaaatcatgttgttctcggatgcgggt
aaggtggtacgctttaaagaagcggaagagtcaccgataaccgatgaagatggcaatccg
gtgttggatgaaaacggcgaagtacagatcacctttaaaggtgtgcgcccaatgggtcgt
accgctaccggtgttcgtggtatcgccttggaagacggtcagaaagttgtttcactgatc
gtgcctcgtggtgatgatgcgattctgaccgttaccgcgaacggctttggtaaacgcacc
gcattggatgaataccccgccaagagccgcgccaccaaaggcgtggtttctatcaaagtc
agcgatcgtaacggcgcagtggtaggcgcggtacaggctgctgaaaatgatgaaatcatg
ctgatcagtgataaaggtacattggtgagaaccccggtttccggcgtttcattaattggc
cgtaacactcagggggtcaccatcatccgcacggctgacgacgaaactgtggtcggactg
caacgcattgacgaaatccaggcagaggacgatgatatcctagacgatgccgaggttgat
atgctgaccgatgccccggataatgaaggcgatattgccgccgatgaagacaccgcagag
taa
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