Shewanella dokdonensis: KHX94_18240
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Entry
KHX94_18240 CDS
T07469
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sdk
Shewanella dokdonensis
Pathway
sdk03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
KHX94_18240 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sdk03011
]
KHX94_18240 (rpsA)
Ribosome [BR:
sdk03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
KHX94_18240 (rpsA)
Bacteria
KHX94_18240 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
OB_RRP5_4th
TOBE
Motif
Other DBs
NCBI-ProteinID:
QVK23031
UniProt:
A0ABX8DFM9
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All DBs
Position
3804086..3805753
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AA seq
555 aa
AA seq
DB search
MTESFADLFEQSLQQLEFRPGSIVRGTVVAIENGMVLVDAGLKSESPIPAEQFKNAQGEL
EIAVGDQVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEENATVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
ITVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTKLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVSLGDEVEVLVLDIDEERRRISLGLKQCKTNPWEDFSNR
YAKGDKVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNNNGEEAVGEYKKGDEITAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGSIVNGTVTAVDAKGVTVELADTVEGYIRV
ADISRERIEDASTVYNVGDSVEAKFMGVDRKNRAISLSIRAKDEAEEKEVMANLNKQEDV
VMTNAMAEAFKAARK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcttttgctgatctgtttgaacaatcccttcaacaactggaatttcgtcca
ggttctatcgtccgcggtactgtagttgccattgaaaatggcatggtgctggttgatgca
ggcctgaaatcagaaagcccaattcctgccgagcagttcaagaacgcccaaggcgaactg
gaaattgctgtaggtgaccaagttgacgtagcgctggacagcgtagaagacggctttggt
gaaacccaactgtctcgtgaaaaagctaagcgccatgaagcctggatcgttctggaaaaa
gcctacgaagaaaatgccaccgttatcggcattatcaacggtaaggttaaaggcggtttc
actgttgaattgaatggtatccgtgcattcctgccaggttcactggttgatgttcgtcca
gtacgcgacactgcgcacctggaaaacaaagaattggaattcaaggttatcaaactggat
cagaaacgtaacaacgtagtggtttctcgccgcgccgttatcgaatctgaaagcagcgcc
gaacgtgacgccctgttggaaaacctgcaggaaggtcaagcggttaaaggtatcgttaaa
aaccttacagactacggtgcatttgtggatctgggtggtgttgacggtctgctgcacatc
actgacatggcatggaaacgcgttaagcatccatctgaaatcgtcaatgttggtgacgaa
atcactgttaaagtgctgaaatatgaccgtgaacgcactcgtgtttcactgggtctgaaa
caactgggtgaagacccatggttggaaatcagcaaacgttatccagaaaacaccaagctg
actggtcgtgtgactaacctgaccgattatggctgcttcgttgaaatcgaagaaggtgtt
gaaggtctggtacacgtatctgaaatggattggaccaacaagaacatccacccatccaag
gttgttagcctgggtgatgaagtggaagttctggtactggatatcgacgaagaacgtcgt
cgtatctctctgggtctgaaacagtgtaagactaacccatgggaagacttctccaaccgt
tacgccaagggcgacaaagttactggtaagatcaaatctatcactgacttcggtatcttc
attggtctggacggtggcatcgatggtctggttcacctgtctgacatctcttggaacaat
aacggcgaagaagctgttggcgaatacaagaaaggtgatgaaatcactgctgttgtactg
tctgttgacccagaacgtgaacgtatcagccttggtgtaaaacagactgaagatgatcct
ttcaatgcctacttggcagataagaagaaaggttctattgtaaacggtacagtaactgct
gttgatgccaaaggcgtgactgtagaactggcggacactgttgaaggttacatccgtgta
gctgatatcagccgcgaacgcatcgaagacgcttctaccgtatacaatgtcggtgatagc
gttgaagccaagtttatgggtgtggatcgtaagaaccgtgccatcagcttgtcaattcgt
gcgaaagacgaagccgaagagaaagaagtaatggctaacctgaataaacaggaagatgtc
gttatgactaacgctatggctgaagcattcaaggcagcccgcaaataa
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